Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm43198-201ENSMUST00000200927 326 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm43967-201ENSMUST00000203787 301 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm16419-201ENSMUST00000221057 625 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm5655-201ENSMUST00000221078 901 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 AF357428-201ENSMUST00000083815 69 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Snord15a-201ENSMUST00000083888 148 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Mir208b-201ENSMUST00000104735 77 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm11869-201ENSMUST00000118701 329 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm13678-201ENSMUST00000118926 340 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm12137-201ENSMUST00000119565 346 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm22516-201ENSMUST00000158266 124 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm22252-201ENSMUST00000179316 79 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm6680-201ENSMUST00000192789 950 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm19233-201ENSMUST00000219772 936 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm9628-201ENSMUST00000222169 725 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.86□□□□□ -1.79
Smc1aQ9CU62 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm22543-201ENSMUST00000104347 94 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm14880-201ENSMUST00000117581 292 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm12090-201ENSMUST00000118692 758 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm27592-201ENSMUST00000157729 126 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm22174-201ENSMUST00000175050 125 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm22692-201ENSMUST00000175055 125 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm27634-201ENSMUST00000175060 126 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm22460-201ENSMUST00000175269 124 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm24365-201ENSMUST00000175384 125 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm44310-201ENSMUST00000175424 126 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm22639-201ENSMUST00000175591 125 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm25198-201ENSMUST00000178574 110 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm24979-201ENSMUST00000178626 126 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm27743-201ENSMUST00000185136 126 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm7634-201ENSMUST00000185778 553 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm36776-201ENSMUST00000207006 203 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm35857-201ENSMUST00000212739 178 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.85□□□□□ -1.79
Smc1aQ9CU62 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm9157-201ENSMUST00000117673 225 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm11693-201ENSMUST00000119625 565 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm12543-201ENSMUST00000120410 543 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm15157-201ENSMUST00000121852 702 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm24289-201ENSMUST00000157629 135 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm25883-201ENSMUST00000157781 271 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm25519-201ENSMUST00000158392 127 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm20542-201ENSMUST00000174582 372 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm3489-201ENSMUST00000190083 528 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms