Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Mir294-201ENSMUST00000104710 84 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm649-201ENSMUST00000117284 1054 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm12889-201ENSMUST00000118684 241 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm14975-201ENSMUST00000118741 664 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm24213-201ENSMUST00000158255 258 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm8161-201ENSMUST00000168739 481 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm5967-201ENSMUST00000172723 494 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm22252-201ENSMUST00000179316 79 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm27033-201ENSMUST00000183226 544 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm27875-201ENSMUST00000184425 123 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm28847-201ENSMUST00000186778 700 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm28534-201ENSMUST00000187744 676 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm29597-201ENSMUST00000188035 308 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm29365-201ENSMUST00000189461 699 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm20811-201ENSMUST00000190500 553 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm30341-201ENSMUST00000194363 289 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm7449-201ENSMUST00000194393 663 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm44404-201ENSMUST00000203979 636 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm45796-201ENSMUST00000212483 114 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm7751-201ENSMUST00000212868 709 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm18892-201ENSMUST00000217628 881 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm25004-201ENSMUST00000083811 161 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
RTRAFQ9CQE8 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.53□□□□□ -2.01
RTRAFQ9CQE8 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm45884-201ENSMUST00000209540 3416 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm24951-201ENSMUST00000102182 109 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm24987-201ENSMUST00000104453 134 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm24469-201ENSMUST00000104487 131 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm14008-201ENSMUST00000120483 274 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm4852-201ENSMUST00000121202 729 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm11575-201ENSMUST00000122243 228 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm26277-201ENSMUST00000157097 152 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm23098-201ENSMUST00000157552 299 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Magea9-ps-202ENSMUST00000167328 899 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm3104-201ENSMUST00000171004 473 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Mir3090-201ENSMUST00000175597 87 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm22395-201ENSMUST00000177427 96 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm25942-201ENSMUST00000180080 110 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm6113-201ENSMUST00000180319 639 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm29408-201ENSMUST00000187536 216 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm10925-201ENSMUST00000189941 678 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm5551-201ENSMUST00000199720 690 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm44718-201ENSMUST00000206886 359 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm23628-201ENSMUST00000082464 173 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.52□□□□□ -2.01
RTRAFQ9CQE8 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm9597-202ENSMUST00000227632 1387 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm14880-201ENSMUST00000117581 292 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms