Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Gm43408-201ENSMUST00000198263 440 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Gm42828-201ENSMUST00000199669 469 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Gm43393-201ENSMUST00000200147 194 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Gm44419-201ENSMUST00000203338 229 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 AC171206.2-201ENSMUST00000215252 389 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim11Q99PQ2 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim11Q99PQ2 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Trim11Q99PQ2 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
Trim11Q99PQ2 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Trim11Q99PQ2 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm12255-201ENSMUST00000117184 284 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm11550-201ENSMUST00000118210 699 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm12137-201ENSMUST00000119565 346 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm25389-201ENSMUST00000157340 286 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm22843-201ENSMUST00000157710 134 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm9830-201ENSMUST00000178509 357 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm2092-201ENSMUST00000178887 639 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm2759-201ENSMUST00000179938 639 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm32536-201ENSMUST00000205209 445 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm2926-201ENSMUST00000205625 239 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm9269-201ENSMUST00000221661 578 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm9512-201ENSMUST00000223112 497 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm26228-201ENSMUST00000082512 107 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm25080-201ENSMUST00000082526 107 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm24525-201ENSMUST00000082917 151 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Snord47-201ENSMUST00000083034 77 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm25518-201ENSMUST00000083864 107 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim11Q99PQ2 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Mir466j-201ENSMUST00000116876 122 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm13537-201ENSMUST00000120467 267 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm25714-201ENSMUST00000158626 296 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm22307-201ENSMUST00000180019 107 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Mir7008-201ENSMUST00000184398 63 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm28660-201ENSMUST00000186496 253 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm9722-201ENSMUST00000194568 802 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm42570-201ENSMUST00000195937 292 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm44481-201ENSMUST00000197288 84 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm43286-201ENSMUST00000197420 424 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm44339-201ENSMUST00000200598 84 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm45678-201ENSMUST00000210509 295 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm7128-201ENSMUST00000211639 533 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Mir338-201ENSMUST00000083666 98 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms