Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm4987-201ENSMUST00000078326 408 ntBASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Gm8526-201ENSMUST00000079153 475 ntBASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Gm23302-201ENSMUST00000082710 100 ntBASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Rpa1Q8VEE4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm26147-201ENSMUST00000104479 114 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm12112-201ENSMUST00000117772 231 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm15772-201ENSMUST00000118533 438 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm15037-201ENSMUST00000120358 259 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm25290-201ENSMUST00000122796 144 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm24687-201ENSMUST00000157758 241 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm25660-201ENSMUST00000158470 104 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Mir7082-201ENSMUST00000183526 92 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm29397-201ENSMUST00000185205 333 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm28996-201ENSMUST00000190316 721 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm18956-201ENSMUST00000192857 480 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm28724-202ENSMUST00000194218 295 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm37029-201ENSMUST00000195773 239 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm42579-201ENSMUST00000200512 734 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm19177-201ENSMUST00000204520 613 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm44446-201ENSMUST00000204864 255 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm44208-201ENSMUST00000205199 421 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm45678-201ENSMUST00000210509 295 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm22807-201ENSMUST00000082737 129 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Rpa1Q8VEE4 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm14619-201ENSMUST00000120480 168 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm25246-201ENSMUST00000175476 69 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm2040-201ENSMUST00000202979 289 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Gm46389-201ENSMUST00000223199 392 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rpa1Q8VEE4 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm15088-201ENSMUST00000117973 1508 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm15098-201ENSMUST00000119036 1508 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm43320-201ENSMUST00000196047 2916 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm13876-201ENSMUST00000118451 261 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm11785-201ENSMUST00000120165 601 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm12785-201ENSMUST00000122052 172 ntBASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpa1Q8VEE4 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms