Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm24889-201ENSMUST00000104388 132 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm11625-201ENSMUST00000119535 296 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm22791-201ENSMUST00000157232 145 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm24774-201ENSMUST00000157384 134 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm26347-201ENSMUST00000157526 131 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm20526-201ENSMUST00000173416 158 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm23799-201ENSMUST00000175559 120 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm26430-201ENSMUST00000178054 107 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm23191-201ENSMUST00000179147 107 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Mir7022-201ENSMUST00000183749 61 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm29228-201ENSMUST00000185489 418 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm8069-201ENSMUST00000197887 154 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm24031-201ENSMUST00000083930 131 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm24522-201ENSMUST00000083964 108 ntBASIC4.36□□□□□ -1.71
Clrn1Q8K445 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Mir667-201ENSMUST00000102441 92 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm22021-201ENSMUST00000104353 107 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm12568-201ENSMUST00000117362 624 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm16089-201ENSMUST00000117679 336 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm11408-201ENSMUST00000117889 519 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm11366-201ENSMUST00000119279 429 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm14647-201ENSMUST00000119392 680 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm11229-201ENSMUST00000121993 437 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm24784-201ENSMUST00000157640 62 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm24240-201ENSMUST00000157785 135 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm24537-201ENSMUST00000157950 102 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm24713-201ENSMUST00000178850 107 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm5558-201ENSMUST00000178933 495 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm25361-201ENSMUST00000179358 76 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm25448-201ENSMUST00000180065 107 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm4854-201ENSMUST00000185902 574 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm9687-201ENSMUST00000189312 602 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm43828-201ENSMUST00000196890 639 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm44720-201ENSMUST00000206076 260 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm7726-201ENSMUST00000206241 231 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm7692-201ENSMUST00000213534 409 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm6065-201ENSMUST00000081336 492 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm25134-201ENSMUST00000082646 160 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm25821-201ENSMUST00000093657 133 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm6043-201ENSMUST00000099961 492 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.35□□□□□ -1.71
Clrn1Q8K445 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Clrn1Q8K445 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms