Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm36934-201ENSMUST00000192007 306 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm28724-202ENSMUST00000194218 295 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm9628-201ENSMUST00000222169 725 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 AC168880.1-201ENSMUST00000225113 707 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Nup88Q8CEC0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm15108-201ENSMUST00000116160 803 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm15111-201ENSMUST00000122142 878 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm22960-201ENSMUST00000122517 104 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm20399-201ENSMUST00000174652 132 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm28598-201ENSMUST00000186490 615 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm29268-201ENSMUST00000188669 615 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm29218-205ENSMUST00000190846 615 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm28978-201ENSMUST00000191120 615 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm28314-201ENSMUST00000191276 345 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm37172-201ENSMUST00000191926 615 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm44387-201ENSMUST00000196298 145 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm2544-201ENSMUST00000222702 756 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nup88Q8CEC0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm7648-201ENSMUST00000173036 1658 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm13603-201ENSMUST00000119404 83 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm16005-201ENSMUST00000120515 269 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm25860-201ENSMUST00000158252 126 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm25438-201ENSMUST00000158281 110 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm5277-201ENSMUST00000164923 556 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Mir5127-201ENSMUST00000175295 71 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm27952-201ENSMUST00000184748 105 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm37111-201ENSMUST00000193250 634 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm43096-201ENSMUST00000196173 421 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm32381-201ENSMUST00000203192 476 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm45080-201ENSMUST00000206648 283 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm45912-201ENSMUST00000210646 543 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm18729-201ENSMUST00000217230 621 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Nup88Q8CEC0 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms