Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm28872-201ENSMUST00000191518 158 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Gm38356-201ENSMUST00000194313 408 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Gm9375-201ENSMUST00000208899 903 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Gm23925-201ENSMUST00000082471 132 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Mir421-201ENSMUST00000083575 76 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.04□□□□□ -1.76
Atg4aQ8C9S8 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm12393-201ENSMUST00000117084 848 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm15659-201ENSMUST00000118881 341 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm14506-201ENSMUST00000121165 536 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm14768-201ENSMUST00000122126 678 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm25806-201ENSMUST00000122782 122 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm24551-201ENSMUST00000158645 92 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm18417-201ENSMUST00000176564 648 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm22776-201ENSMUST00000178634 94 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm23767-201ENSMUST00000179278 94 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm21991-201ENSMUST00000180006 508 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm18727-201ENSMUST00000185981 553 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm7142-201ENSMUST00000194232 586 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm5983-201ENSMUST00000197739 770 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm44181-201ENSMUST00000203106 483 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm18410-201ENSMUST00000207199 577 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm17850-201ENSMUST00000210023 1154 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm29817-201ENSMUST00000210098 172 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm10237-201ENSMUST00000078393 273 ntBASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Atg4aQ8C9S8 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm14677-201ENSMUST00000117866 486 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm13076-201ENSMUST00000118041 204 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm12639-201ENSMUST00000121400 493 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm23957-201ENSMUST00000157209 90 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm22380-201ENSMUST00000157479 95 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm16318-201ENSMUST00000162402 601 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm28069-201ENSMUST00000189926 214 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm37337-201ENSMUST00000192601 993 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm37418-201ENSMUST00000195031 274 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm44634-201ENSMUST00000206119 152 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm18921-201ENSMUST00000221798 366 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Atg4aQ8C9S8 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.01□□□□□ -1.77
Atg4aQ8C9S8 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.01□□□□□ -1.77
Atg4aQ8C9S8 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms