Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Snord22-201ENSMUST00000083153 126 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm13349-201ENSMUST00000118436 411 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm14541-201ENSMUST00000118985 157 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm11321-201ENSMUST00000121257 902 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm12103-201ENSMUST00000121892 362 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm12368-201ENSMUST00000122251 434 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm25334-201ENSMUST00000158036 110 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm27919-201ENSMUST00000185163 107 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm5552-201ENSMUST00000197149 515 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm42622-201ENSMUST00000197229 355 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm18462-201ENSMUST00000208112 417 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm18320-201ENSMUST00000211304 595 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm7240-201ENSMUST00000220769 664 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Trerf1Q8BXJ2 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Snord66-201ENSMUST00000104051 75 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm22472-201ENSMUST00000104115 134 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm14352-201ENSMUST00000119250 449 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm15266-201ENSMUST00000119635 255 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm13627-201ENSMUST00000119700 706 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm13751-201ENSMUST00000120280 752 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm2005-201ENSMUST00000120759 542 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm12006-201ENSMUST00000120786 403 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm14916-201ENSMUST00000121904 204 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm3191-201ENSMUST00000167139 346 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm14527-201ENSMUST00000179300 639 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm21960-201ENSMUST00000181924 452 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm27317-201ENSMUST00000183533 95 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm5368-201ENSMUST00000189012 589 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm43586-201ENSMUST00000195948 310 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm43035-201ENSMUST00000197626 517 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm17951-201ENSMUST00000198536 496 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm42818-201ENSMUST00000198869 987 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm43954-201ENSMUST00000204634 544 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm19908-201ENSMUST00000204684 391 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm44543-201ENSMUST00000209136 396 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 AC157017.1-201ENSMUST00000220148 364 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 AC163295.1-201ENSMUST00000227840 314 ntBASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Trerf1Q8BXJ2 Gm23510-201ENSMUST00000083083 163 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms