Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm30638-201ENSMUST00000195570 656 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm36728-201ENSMUST00000195782 665 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm43114-201ENSMUST00000198298 343 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm43513-201ENSMUST00000199779 1076 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm43424-201ENSMUST00000200484 253 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm8820-201ENSMUST00000204077 571 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4□□□□□ -1.77
Usp43Q8BUM9 AC160134.1-201ENSMUST00000213450 551 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm18113-201ENSMUST00000220630 303 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4□□□□□ -1.77
Usp43Q8BUM9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm23447-201ENSMUST00000082798 163 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm24446-201ENSMUST00000083982 156 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4□□□□□ -1.77
Usp43Q8BUM9 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm45176-201ENSMUST00000207696 4096 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Usp43Q8BUM9 Gm6215-201ENSMUST00000119297 1386 ntBASIC4□□□□□ -1.77
Usp43Q8BUM9 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Usp43Q8BUM9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Mir551b-201ENSMUST00000102165 98 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm22493-201ENSMUST00000104494 132 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm14835-201ENSMUST00000119039 315 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm11512-201ENSMUST00000119669 663 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm11506-201ENSMUST00000122414 470 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm24850-201ENSMUST00000158029 119 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm15946-201ENSMUST00000160654 423 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm22166-201ENSMUST00000178419 121 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm23288-201ENSMUST00000179213 121 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm21960-201ENSMUST00000181924 452 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm29334-201ENSMUST00000190334 357 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm28872-201ENSMUST00000191518 158 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm44521-201ENSMUST00000206469 217 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm45366-201ENSMUST00000209828 384 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm7495-201ENSMUST00000215099 426 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm23518-201ENSMUST00000082835 153 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm25200-201ENSMUST00000083094 130 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Mir346-201ENSMUST00000083547 98 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.99□□□□□ -1.77
Usp43Q8BUM9 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp43Q8BUM9 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm23691-201ENSMUST00000101878 107 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm11268-201ENSMUST00000118347 267 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm12268-201ENSMUST00000118398 442 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm14517-201ENSMUST00000119040 337 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm14731-201ENSMUST00000119216 376 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm7916-201ENSMUST00000120325 456 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Gm11522-201ENSMUST00000120533 176 ntBASIC3.98□□□□□ -1.77
Usp43Q8BUM9 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms