Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm37002-201ENSMUST00000194560 373 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm19243-201ENSMUST00000198592 269 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm43142-201ENSMUST00000198670 361 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm4036-201ENSMUST00000220842 626 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm8231-201ENSMUST00000221617 783 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm25480-201ENSMUST00000083217 133 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm11252-201ENSMUST00000120572 939 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm15120-201ENSMUST00000120602 301 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm25105-201ENSMUST00000122477 130 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm4725-201ENSMUST00000151048 587 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm22310-201ENSMUST00000157509 116 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm26701-201ENSMUST00000181571 234 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm37576-201ENSMUST00000194228 372 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm37617-201ENSMUST00000194309 159 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc40Q8BI79 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm12902-201ENSMUST00000118389 322 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm12881-201ENSMUST00000121191 203 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm12998-201ENSMUST00000122445 789 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm23666-201ENSMUST00000158053 116 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm20534-201ENSMUST00000172957 172 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm27648-201ENSMUST00000184315 107 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm27392-201ENSMUST00000185041 101 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm28390-201ENSMUST00000185212 700 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm32447-201ENSMUST00000194265 697 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm9632-201ENSMUST00000195934 643 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm8209-201ENSMUST00000206386 553 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm12582-201ENSMUST00000030555 697 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Mir132-201ENSMUST00000083603 66 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc40Q8BI79 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms