Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm24581-201ENSMUST00000103962 133 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm13614-201ENSMUST00000117306 503 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm14877-201ENSMUST00000119803 478 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm14939-201ENSMUST00000120347 680 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm23326-201ENSMUST00000157419 105 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm26487-201ENSMUST00000158022 94 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm26988-201ENSMUST00000183296 945 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm36943-201ENSMUST00000194422 282 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm18327-201ENSMUST00000202426 830 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm43039-201ENSMUST00000202883 963 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm19244-201ENSMUST00000204340 253 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm18597-201ENSMUST00000209519 694 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm23925-201ENSMUST00000082471 132 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm24147-201ENSMUST00000082763 144 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm23136-201ENSMUST00000083425 99 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm15799-201ENSMUST00000120899 289 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm6591-201ENSMUST00000121063 434 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm24936-201ENSMUST00000122598 247 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm24289-201ENSMUST00000157629 135 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm24417-201ENSMUST00000178123 79 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm24653-201ENSMUST00000178541 79 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm25934-201ENSMUST00000178642 79 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm8242-202ENSMUST00000193056 475 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm17917-201ENSMUST00000218561 953 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Gm23738-201ENSMUST00000082828 171 ntBASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Clrn3Q8BHH8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm24951-201ENSMUST00000102182 109 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm26423-201ENSMUST00000104277 128 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm23791-201ENSMUST00000122553 293 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm14562-201ENSMUST00000129885 543 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm8161-201ENSMUST00000168739 481 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm27527-201ENSMUST00000183903 99 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm28069-201ENSMUST00000189926 214 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm44266-201ENSMUST00000205235 500 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm17838-201ENSMUST00000205872 876 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm7443-201ENSMUST00000206355 378 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Gm46234-201ENSMUST00000218702 259 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Snora7a-201ENSMUST00000082629 140 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.03□□□□□ -1.92
Clrn3Q8BHH8 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Clrn3Q8BHH8 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.02□□□□□ -1.93
Clrn3Q8BHH8 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clrn3Q8BHH8 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clrn3Q8BHH8 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Clrn3Q8BHH8 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.02□□□□□ -1.93
Clrn3Q8BHH8 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clrn3Q8BHH8 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms