Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 AC126440.1-201ENSMUST00000227098 349 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubp1Q811S7 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubp1Q811S7 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ubp1Q811S7 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.21□□□□□ -1.57
Ubp1Q811S7 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
Ubp1Q811S7 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.21□□□□□ -1.57
Ubp1Q811S7 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
Ubp1Q811S7 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubp1Q811S7 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Mir743b-201ENSMUST00000104751 77 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm14871-201ENSMUST00000119056 194 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm13537-201ENSMUST00000120467 267 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm11388-201ENSMUST00000120908 159 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm26149-201ENSMUST00000157432 108 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm22383-201ENSMUST00000158188 327 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm24295-201ENSMUST00000158298 131 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Mir7687-201ENSMUST00000184722 59 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm27624-201ENSMUST00000185047 177 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm43554-201ENSMUST00000199987 186 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm45215-201ENSMUST00000206407 395 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm26164-201ENSMUST00000083793 104 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.21□□□□□ -1.58
Ubp1Q811S7 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubp1Q811S7 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ubp1Q811S7 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ubp1Q811S7 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm26067-201ENSMUST00000103789 110 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm26147-201ENSMUST00000104479 114 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm13378-201ENSMUST00000117483 336 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm13122-201ENSMUST00000118380 453 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm25176-201ENSMUST00000122640 125 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm24477-201ENSMUST00000157438 103 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm23318-201ENSMUST00000158000 108 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm7609-204ENSMUST00000161424 461 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm27541-201ENSMUST00000184078 122 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29320-201ENSMUST00000185235 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29179-202ENSMUST00000186138 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29448-201ENSMUST00000186675 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29314-201ENSMUST00000186800 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28683-201ENSMUST00000187134 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28253-202ENSMUST00000187971 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28840-205ENSMUST00000189320 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm29169-201ENSMUST00000189835 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28835-203ENSMUST00000190062 615 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm4322-201ENSMUST00000191094 336 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm2719-201ENSMUST00000191929 444 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm37603-201ENSMUST00000192368 219 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm37445-201ENSMUST00000195318 242 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm44349-201ENSMUST00000197048 123 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Mir409-201ENSMUST00000198153 79 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm44324-201ENSMUST00000198517 135 ntBASIC5.2□□□□□ -1.58
Ubp1Q811S7 Gm18453-201ENSMUST00000208000 626 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms