Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm25434-201ENSMUST00000158278 167 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm20698-201ENSMUST00000175657 233 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm22991-201ENSMUST00000178126 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm25754-201ENSMUST00000178653 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm22419-201ENSMUST00000178780 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm24802-201ENSMUST00000178897 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm25208-201ENSMUST00000178964 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm8532-201ENSMUST00000179174 461 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm24567-201ENSMUST00000179294 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm23943-201ENSMUST00000179712 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm25228-201ENSMUST00000180121 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm23304-201ENSMUST00000180209 121 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm29134-201ENSMUST00000186579 126 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm20885-201ENSMUST00000190192 654 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm9134-201ENSMUST00000193186 551 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm18971-201ENSMUST00000197240 374 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm44060-201ENSMUST00000204440 410 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm45101-201ENSMUST00000208327 232 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm8942-201ENSMUST00000217892 400 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm24037-201ENSMUST00000082871 180 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Pif1Q80SX8 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.72□□□□□ -1.65
Pif1Q80SX8 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Pif1Q80SX8 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Pif1Q80SX8 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm14355-201ENSMUST00000117352 264 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm2066-201ENSMUST00000118046 389 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm8145-201ENSMUST00000118220 745 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm14647-201ENSMUST00000119392 680 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm14333-201ENSMUST00000130484 264 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm24552-201ENSMUST00000158646 103 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm16569-201ENSMUST00000160526 314 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm3370-201ENSMUST00000171785 500 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm28399-201ENSMUST00000186221 318 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm28572-201ENSMUST00000187444 318 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm34015-201ENSMUST00000194908 451 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm4714-201ENSMUST00000203395 279 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm44726-201ENSMUST00000203427 217 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm44149-201ENSMUST00000204256 226 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm44521-201ENSMUST00000206469 217 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm9512-201ENSMUST00000223112 497 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 mt-Tr-201ENSMUST00000082412 68 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Mir20a-201ENSMUST00000083508 107 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm22826-201ENSMUST00000083774 165 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Smc5-206ENSMUST00000226111 3265 ntBASIC4.71□□□□□ -1.66
Pif1Q80SX8 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pif1Q80SX8 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm22831-201ENSMUST00000102473 109 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm24469-201ENSMUST00000104487 131 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Pif1Q80SX8 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Gm12112-201ENSMUST00000117772 231 ntBASIC4.7□□□□□ -1.66
Pif1Q80SX8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms