Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm12706-201ENSMUST00000121588 698 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm14129-201ENSMUST00000122436 291 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm16274-201ENSMUST00000139251 592 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm23981-201ENSMUST00000157136 106 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm25447-201ENSMUST00000158997 128 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm7094-201ENSMUST00000178379 366 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm23186-201ENSMUST00000180078 107 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Mir6382-201ENSMUST00000184055 110 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm8790-201ENSMUST00000194108 322 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Trbv11-201ENSMUST00000194354 260 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm8125-201ENSMUST00000216602 738 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Mir551b-201ENSMUST00000102165 98 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm22269-201ENSMUST00000104002 130 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm14359-201ENSMUST00000118883 424 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm13273-201ENSMUST00000119737 159 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm11448-201ENSMUST00000120427 450 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm13574-201ENSMUST00000120482 394 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm5379-201ENSMUST00000120973 826 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm14366-201ENSMUST00000121970 730 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm9498-201ENSMUST00000140849 291 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm22314-201ENSMUST00000158007 281 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm26036-201ENSMUST00000158149 144 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm25037-201ENSMUST00000175418 110 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm24306-201ENSMUST00000180229 79 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm7449-201ENSMUST00000194393 663 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm19457-201ENSMUST00000200995 448 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm44765-201ENSMUST00000206927 601 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm44543-201ENSMUST00000209136 396 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm18774-201ENSMUST00000218269 601 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Mir19a-201ENSMUST00000083482 82 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ubfd1Q78JW9 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm7363-201ENSMUST00000119883 399 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm9003-201ENSMUST00000121810 482 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm26045-201ENSMUST00000157862 97 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm25553-201ENSMUST00000158076 79 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm22859-201ENSMUST00000174978 122 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Mir6996-201ENSMUST00000183922 61 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm28283-201ENSMUST00000185509 178 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm36259-201ENSMUST00000197340 392 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm45232-201ENSMUST00000207811 162 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms