Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm29573-201ENSMUST00000190291 919 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 Gm43975-201ENSMUST00000203023 481 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim27Q62158 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim27Q62158 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim27Q62158 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim27Q62158 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 Olfr815-201ENSMUST00000071557 951 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.21□□□□□ -1.74
Trim27Q62158 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim27Q62158 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim27Q62158 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim27Q62158 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Gm24936-201ENSMUST00000122598 247 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim27Q62158 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim27Q62158 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim27Q62158 Gm22036-201ENSMUST00000157279 215 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Gm24505-201ENSMUST00000157682 126 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim27Q62158 Gm20648-201ENSMUST00000175815 328 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Gm43227-201ENSMUST00000202239 677 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Gm17893-201ENSMUST00000203017 770 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Gm18116-201ENSMUST00000220920 537 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim27Q62158 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim27Q62158 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim27Q62158 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim27Q62158 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim27Q62158 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim27Q62158 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.2□□□□□ -1.74
Trim27Q62158 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim27Q62158 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim27Q62158 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Trim27Q62158 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim27Q62158 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim27Q62158 Mir667-201ENSMUST00000102441 92 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm24544-201ENSMUST00000103862 110 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm12125-201ENSMUST00000117261 736 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm13731-201ENSMUST00000117332 196 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm13167-201ENSMUST00000118554 578 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm15142-201ENSMUST00000121013 856 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm24060-201ENSMUST00000157494 95 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm2966-201ENSMUST00000166052 481 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Mir6914-201ENSMUST00000184999 69 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm38280-201ENSMUST00000192610 158 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm36943-201ENSMUST00000194422 282 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm43070-201ENSMUST00000196938 415 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm45382-201ENSMUST00000210607 151 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm35558-202ENSMUST00000221819 499 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm25592-201ENSMUST00000082635 131 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.19□□□□□ -1.74
Trim27Q62158 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim27Q62158 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim27Q62158 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim27Q62158 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim27Q62158 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim27Q62158 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim27Q62158 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim27Q62158 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim27Q62158 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim27Q62158 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim27Q62158 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Trim27Q62158 Gm12025-201ENSMUST00000117768 144 ntBASIC4.18□□□□□ -1.74
Trim27Q62158 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC4.18□□□□□ -1.74
Trim27Q62158 Gm23755-201ENSMUST00000157578 343 ntBASIC4.18□□□□□ -1.74
Trim27Q62158 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim27Q62158 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms