Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm9845-201ENSMUST00000056409 598 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Usf1Q61069 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Usf1Q61069 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Usf1Q61069 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Usf1Q61069 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Usf1Q61069 Gm24068-201ENSMUST00000104513 132 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Gm14647-201ENSMUST00000119392 680 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Gm8244-201ENSMUST00000121254 264 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.15□□□□□ -1.91
Usf1Q61069 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.15□□□□□ -1.91
Usf1Q61069 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Usf1Q61069 Gm6113-201ENSMUST00000180319 639 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Usf1Q61069 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.15□□□□□ -1.91
Usf1Q61069 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.15□□□□□ -1.91
Usf1Q61069 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Gm7624-201ENSMUST00000209702 435 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Usf1Q61069 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Usf1Q61069 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Usf1Q61069 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Usf1Q61069 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Usf1Q61069 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.15□□□□□ -1.91
Usf1Q61069 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Usf1Q61069 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Usf1Q61069 Mir208b-201ENSMUST00000104735 77 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm13379-201ENSMUST00000118053 621 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm5943-201ENSMUST00000119458 459 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm16021-201ENSMUST00000121176 219 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm12819-201ENSMUST00000122223 629 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm22107-201ENSMUST00000122548 100 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Usf1Q61069 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm25373-201ENSMUST00000158156 115 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm24811-201ENSMUST00000175313 100 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm37319-201ENSMUST00000193500 636 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm5552-201ENSMUST00000197149 515 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm19233-201ENSMUST00000219772 936 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Usf1Q61069 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usf1Q61069 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usf1Q61069 Gm23615-201ENSMUST00000082602 65 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm26129-201ENSMUST00000082719 107 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm22575-201ENSMUST00000082981 110 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Gm25581-201ENSMUST00000083410 164 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.14□□□□□ -1.91
Usf1Q61069 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Usf1Q61069 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usf1Q61069 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Usf1Q61069 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usf1Q61069 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.13□□□□□ -1.91
Usf1Q61069 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usf1Q61069 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usf1Q61069 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.13□□□□□ -1.91
Usf1Q61069 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usf1Q61069 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Usf1Q61069 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Usf1Q61069 Gm22543-201ENSMUST00000104347 94 ntBASIC3.13□□□□□ -1.91
Usf1Q61069 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usf1Q61069 Gm15159-201ENSMUST00000117062 764 ntBASIC3.13□□□□□ -1.91
Usf1Q61069 Gm11923-201ENSMUST00000118135 508 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms