Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm43600-201ENSMUST00000202134 223 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm23128-201ENSMUST00000104257 132 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm26247-201ENSMUST00000116702 91 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm36638-201ENSMUST00000193295 400 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm23128-202ENSMUST00000196578 133 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm23623-201ENSMUST00000082461 107 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm22782-201ENSMUST00000104082 132 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm25500-201ENSMUST00000104426 123 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm13511-201ENSMUST00000121167 363 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm23116-201ENSMUST00000158481 67 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm8392-201ENSMUST00000185647 835 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm24922-201ENSMUST00000158511 102 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45588-201ENSMUST00000211213 630 ntBASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc88aQ5SNZ0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm24541-201ENSMUST00000103871 96 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm14890-201ENSMUST00000117660 676 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm12878-201ENSMUST00000118744 332 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm11446-201ENSMUST00000121319 866 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm22730-201ENSMUST00000158085 171 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm24075-201ENSMUST00000158175 72 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm27379-201ENSMUST00000183730 123 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm25820-201ENSMUST00000198589 127 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm44845-201ENSMUST00000208773 335 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm10343-201ENSMUST00000096279 348 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88aQ5SNZ0 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm12598-201ENSMUST00000117333 830 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm14593-201ENSMUST00000119948 294 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm23409-201ENSMUST00000158516 237 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm38332-201ENSMUST00000194189 147 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm14843-201ENSMUST00000119596 212 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm24879-201ENSMUST00000158386 143 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm20718-201ENSMUST00000176058 259 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms