Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm15073-201ENSMUST00000117432 634 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm14621-201ENSMUST00000117709 689 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm15844-201ENSMUST00000118016 576 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm14739-201ENSMUST00000120424 802 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm13676-201ENSMUST00000122185 591 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm11233-201ENSMUST00000122357 634 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm14903-201ENSMUST00000122435 537 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm23897-201ENSMUST00000158110 158 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm3370-201ENSMUST00000171785 500 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm28552-201ENSMUST00000190725 388 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm28467-201ENSMUST00000190981 318 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm40692-201ENSMUST00000220411 491 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 AC154727.1-201ENSMUST00000226537 499 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 AC117199.1-201ENSMUST00000219940 3132 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm11913-201ENSMUST00000119094 336 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm11366-201ENSMUST00000119279 429 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Klra14-ps-201ENSMUST00000119532 802 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm16250-201ENSMUST00000148974 256 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm23469-201ENSMUST00000157131 104 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm22554-201ENSMUST00000157798 147 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm23642-201ENSMUST00000157858 258 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm25713-201ENSMUST00000158625 109 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm25971-201ENSMUST00000158953 286 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm23925-202ENSMUST00000188429 132 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm37557-201ENSMUST00000191640 139 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm38098-201ENSMUST00000194115 241 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm6112-201ENSMUST00000208037 629 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm44892-201ENSMUST00000208595 488 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm45474-201ENSMUST00000209471 408 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm6929-201ENSMUST00000210930 468 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 AC108416.2-201ENSMUST00000226792 367 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm7099-201ENSMUST00000080066 554 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm25856-201ENSMUST00000082786 75 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Snord35b-201ENSMUST00000082833 87 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm13058-201ENSMUST00000117097 1435 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm43092-201ENSMUST00000202986 1854 ntBASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav3-1Q5R1I8 Gm43889-201ENSMUST00000203950 3681 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm23879-201ENSMUST00000116874 126 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm11372-201ENSMUST00000117348 570 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm12252-201ENSMUST00000119517 219 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm13627-201ENSMUST00000119700 706 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm12190-201ENSMUST00000120001 187 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm12155-201ENSMUST00000121267 160 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm26148-201ENSMUST00000157430 68 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm27414-201ENSMUST00000185033 381 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Igkv9-128-201ENSMUST00000196602 353 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm43524-201ENSMUST00000197278 298 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm43600-201ENSMUST00000202134 223 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm19253-201ENSMUST00000204279 307 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC1.81□□□□□ -2.12
Trav3-1Q5R1I8 Gm6049-201ENSMUST00000222369 458 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms