Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.86□□□□□ -1.79
Trim58Q5NCC9 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.86□□□□□ -1.79
Trim58Q5NCC9 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.86□□□□□ -1.79
Trim58Q5NCC9 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Trim58Q5NCC9 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.86□□□□□ -1.79
Trim58Q5NCC9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim58Q5NCC9 BC051076-202ENSMUST00000199477 2868 ntBASIC3.86□□□□□ -1.79
Trim58Q5NCC9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
Trim58Q5NCC9 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim58Q5NCC9 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim58Q5NCC9 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Mir693-201ENSMUST00000102187 89 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm15159-201ENSMUST00000117062 764 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm12723-201ENSMUST00000120700 451 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm13557-201ENSMUST00000120771 382 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm23667-201ENSMUST00000157466 120 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm26297-201ENSMUST00000179464 132 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm18406-201ENSMUST00000185872 669 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm29259-201ENSMUST00000186396 694 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm43746-201ENSMUST00000200028 317 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm43440-201ENSMUST00000201957 729 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm44157-201ENSMUST00000204720 410 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm45189-201ENSMUST00000208567 363 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm46233-201ENSMUST00000217831 449 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm26129-201ENSMUST00000082719 107 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm23738-201ENSMUST00000082828 171 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm22043-201ENSMUST00000082993 158 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.85□□□□□ -1.79
Trim58Q5NCC9 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm13009-201ENSMUST00000121307 267 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm22187-201ENSMUST00000157819 129 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm22646-201ENSMUST00000175130 115 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm9765-201ENSMUST00000043170 321 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm22739-201ENSMUST00000083437 160 ntBASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim58Q5NCC9 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.84□□□□□ -1.8
Trim58Q5NCC9 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim58Q5NCC9 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.84□□□□□ -1.8
Trim58Q5NCC9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm12881-201ENSMUST00000121191 203 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm23205-201ENSMUST00000158671 103 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm22693-201ENSMUST00000175049 442 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm21893-201ENSMUST00000179119 397 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm27796-201ENSMUST00000183863 261 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm37599-201ENSMUST00000193067 489 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm7142-201ENSMUST00000194232 586 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm17935-201ENSMUST00000196649 772 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm30738-201ENSMUST00000221346 502 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm18338-201ENSMUST00000222381 560 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm23104-201ENSMUST00000083722 104 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.83□□□□□ -1.8
Trim58Q5NCC9 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms