Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm22908-201ENSMUST00000177620 110 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Usp28Q5I043 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm9765-201ENSMUST00000043170 321 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm25313-201ENSMUST00000101817 116 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm14389-201ENSMUST00000140453 241 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm26277-201ENSMUST00000157097 152 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm23667-201ENSMUST00000157466 120 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm24730-201ENSMUST00000158228 117 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm7582-201ENSMUST00000160831 603 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm17075-201ENSMUST00000171924 670 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm25470-201ENSMUST00000175576 111 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm23287-201ENSMUST00000179427 116 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm23143-201ENSMUST00000180137 116 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm17935-201ENSMUST00000196649 772 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm43104-201ENSMUST00000197234 311 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm44688-201ENSMUST00000209083 537 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Usp28Q5I043 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usp28Q5I043 Gm24871-201ENSMUST00000083099 116 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.34□□□□□ -1.87
Usp28Q5I043 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Usp28Q5I043 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usp28Q5I043 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm22590-201ENSMUST00000104247 128 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm23609-201ENSMUST00000104542 127 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm15799-201ENSMUST00000120899 289 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm12276-201ENSMUST00000121709 301 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm15157-201ENSMUST00000121852 702 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm23325-201ENSMUST00000157422 129 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm16490-201ENSMUST00000165299 351 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm27700-201ENSMUST00000185003 81 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm38214-201ENSMUST00000192581 988 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm37993-201ENSMUST00000195301 988 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.33□□□□□ -1.88
Usp28Q5I043 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm8942-201ENSMUST00000217892 400 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm5176-202ENSMUST00000220267 583 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.33□□□□□ -1.88
Usp28Q5I043 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usp28Q5I043 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usp28Q5I043 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usp28Q5I043 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Mir673-201ENSMUST00000102361 91 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm14448-201ENSMUST00000116383 210 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm15988-201ENSMUST00000118677 367 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm12458-201ENSMUST00000119387 495 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm12755-201ENSMUST00000122297 282 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm24960-201ENSMUST00000157923 90 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.32□□□□□ -1.88
Usp28Q5I043 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm32340-201ENSMUST00000192883 259 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm7182-201ENSMUST00000193351 732 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms