Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Gm23738-201ENSMUST00000082828 171 ntBASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm13433-201ENSMUST00000121701 240 ntBASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm25470-201ENSMUST00000175576 111 ntBASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm22264-201ENSMUST00000178200 107 ntBASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm29335-201ENSMUST00000188361 459 ntBASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc88bQ4QRL3 Gm22752-201ENSMUST00000102083 109 ntBASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Gm14897-201ENSMUST00000118213 207 ntBASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Gm12757-201ENSMUST00000119465 800 ntBASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Gm11446-201ENSMUST00000121319 866 ntBASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Gm7582-201ENSMUST00000160831 603 ntBASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Gm45588-201ENSMUST00000211213 630 ntBASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Ccdc88bQ4QRL3 Gm24120-201ENSMUST00000103978 129 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm25938-201ENSMUST00000104139 166 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm15536-201ENSMUST00000121411 114 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm22330-201ENSMUST00000158068 115 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm43804-201ENSMUST00000198280 456 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm44208-201ENSMUST00000205199 421 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm23264-201ENSMUST00000083372 107 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm42445-201ENSMUST00000196996 2893 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm44715-201ENSMUST00000209049 3839 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm11943-201ENSMUST00000119473 327 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm11866-201ENSMUST00000120209 335 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm23409-201ENSMUST00000158516 237 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm27369-201ENSMUST00000185182 71 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Gm46996-201ENSMUST00000220924 408 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 AC115735.1-201ENSMUST00000226633 350 ntBASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.3□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Gm43256-201ENSMUST00000199995 3091 ntBASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Gm5396-201ENSMUST00000121222 532 ntBASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Gm27786-201ENSMUST00000184337 70 ntBASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Gm28639-201ENSMUST00000191519 481 ntBASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Gm45200-201ENSMUST00000207434 919 ntBASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.29□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm44114-201ENSMUST00000203270 2727 ntBASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm15974-201ENSMUST00000159103 531 ntBASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm25476-201ENSMUST00000175125 185 ntBASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm43512-201ENSMUST00000198495 176 ntBASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Ccdc88bQ4QRL3 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm12878-201ENSMUST00000118744 332 ntBASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm13588-201ENSMUST00000120026 135 ntBASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Ccdc88bQ4QRL3 Gm23889-201ENSMUST00000122689 104 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm22803-201ENSMUST00000158049 283 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm16236-201ENSMUST00000159588 379 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms