Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm44016-201ENSMUST00000203463 164 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm6776-201ENSMUST00000057752 900 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm24281-201ENSMUST00000104234 136 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Mir466n-201ENSMUST00000104798 94 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Mir467h-201ENSMUST00000116759 121 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm16431-201ENSMUST00000117454 431 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm7429-201ENSMUST00000118664 348 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm12252-201ENSMUST00000119517 219 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm11600-201ENSMUST00000119592 240 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm6591-201ENSMUST00000121063 434 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm11389-201ENSMUST00000121407 430 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Snrpert-201ENSMUST00000121967 279 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm15147-201ENSMUST00000122263 483 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm23032-201ENSMUST00000157995 107 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm24503-201ENSMUST00000158454 135 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm25369-201ENSMUST00000158848 132 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm29389-201ENSMUST00000191562 352 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm37987-201ENSMUST00000194999 825 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm43415-201ENSMUST00000201934 750 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.34□□□□□ -1.87
Trim40Q3UWA4 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.34□□□□□ -1.88
Trim40Q3UWA4 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.34□□□□□ -1.88
Trim40Q3UWA4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.34□□□□□ -1.88
Trim40Q3UWA4 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.34□□□□□ -1.88
Trim40Q3UWA4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Mir592-201ENSMUST00000102113 96 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm14125-201ENSMUST00000113442 680 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm13731-201ENSMUST00000117332 196 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm14731-201ENSMUST00000119216 376 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm12900-201ENSMUST00000120919 573 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm4852-201ENSMUST00000121202 729 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm25967-201ENSMUST00000157168 147 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm25341-201ENSMUST00000157461 268 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm23023-201ENSMUST00000158767 109 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm17377-201ENSMUST00000165184 207 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm7346-201ENSMUST00000169661 476 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm6900-201ENSMUST00000178971 342 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm22307-201ENSMUST00000180019 107 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm11394-201ENSMUST00000181421 517 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm28412-201ENSMUST00000187243 177 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm29516-201ENSMUST00000190402 468 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms