Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm14577-201ENSMUST00000121134 256 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm22841-201ENSMUST00000158443 62 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Mir3058-201ENSMUST00000175126 91 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm28390-201ENSMUST00000185212 700 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm43214-201ENSMUST00000199242 352 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm45146-201ENSMUST00000207108 221 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddb1Q3U1J4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm23691-201ENSMUST00000101878 107 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm16431-201ENSMUST00000117454 431 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm14142-201ENSMUST00000117833 296 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm11268-201ENSMUST00000118347 267 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm15443-201ENSMUST00000118947 820 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm12564-201ENSMUST00000119860 321 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm6591-201ENSMUST00000121063 434 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm3030-201ENSMUST00000163410 516 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm45316-201ENSMUST00000210128 162 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm45367-201ENSMUST00000210171 347 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Gm24446-201ENSMUST00000083982 156 ntBASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ddb1Q3U1J4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ddb1Q3U1J4 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ddb1Q3U1J4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ddb1Q3U1J4 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ddb1Q3U1J4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm25507-201ENSMUST00000116981 144 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm12982-201ENSMUST00000117408 190 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm11352-201ENSMUST00000119264 517 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm14785-201ENSMUST00000120185 539 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm13574-201ENSMUST00000120482 394 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm23755-201ENSMUST00000157578 343 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm24636-201ENSMUST00000158673 288 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm25835-201ENSMUST00000158917 144 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm24664-201ENSMUST00000158939 100 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm17155-201ENSMUST00000165969 473 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm22307-201ENSMUST00000180019 107 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm18296-201ENSMUST00000192475 783 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm43586-201ENSMUST00000195948 310 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm42438-201ENSMUST00000197832 974 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms