Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm37167-201ENSMUST00000194946 396 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm44611-201ENSMUST00000207507 355 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm45523-201ENSMUST00000210712 799 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm46996-201ENSMUST00000220924 408 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Olfr881-201ENSMUST00000074611 948 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm25699-201ENSMUST00000082896 167 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm22572-201ENSMUST00000082985 105 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm25793-201ENSMUST00000083287 107 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm5518-201ENSMUST00000084171 648 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm6043-201ENSMUST00000099961 492 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.39□□□□□ -1.71
Usp39Q3TIX9 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14594-201ENSMUST00000118052 537 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14933-201ENSMUST00000118840 481 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14590-201ENSMUST00000118934 537 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm12379-201ENSMUST00000119607 391 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm22073-201ENSMUST00000122668 189 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm25106-201ENSMUST00000122672 134 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm4487-201ENSMUST00000150617 442 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm25923-201ENSMUST00000158312 138 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm23473-201ENSMUST00000158883 116 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm3030-201ENSMUST00000163410 516 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm2092-201ENSMUST00000178887 639 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm2759-201ENSMUST00000179938 639 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14596-201ENSMUST00000180268 537 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm14595-201ENSMUST00000180335 537 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Mir7074-201ENSMUST00000183884 63 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Mir6933-201ENSMUST00000184982 81 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm28390-201ENSMUST00000185212 700 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm28299-201ENSMUST00000189908 339 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm44041-201ENSMUST00000203678 396 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm44852-201ENSMUST00000207950 369 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm25141-201ENSMUST00000083177 107 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm24031-201ENSMUST00000083930 131 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp39Q3TIX9 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.38□□□□□ -1.71
Usp39Q3TIX9 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Fus-202ENSMUST00000079045 2623 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Mir676-201ENSMUST00000102443 89 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm22493-201ENSMUST00000104494 132 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm25726-201ENSMUST00000104529 129 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm14163-201ENSMUST00000117342 217 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms