Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm44142-201ENSMUST00000203358 311 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm44149-201ENSMUST00000204256 226 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm45105-201ENSMUST00000207824 397 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.89□□□□□ -1.63
Ssrp1Q08943 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm25792-201ENSMUST00000083289 100 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm23970-201ENSMUST00000083319 107 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm22740-201ENSMUST00000083439 109 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ssrp1Q08943 BC051076-202ENSMUST00000199477 2868 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.89□□□□□ -1.63
Ssrp1Q08943 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Ssrp1Q08943 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm11813-201ENSMUST00000118586 291 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm11429-201ENSMUST00000119089 144 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm15112-201ENSMUST00000120152 860 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm13745-201ENSMUST00000121994 527 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm23078-201ENSMUST00000157848 148 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm24439-201ENSMUST00000157894 117 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm25603-201ENSMUST00000158361 105 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm24550-201ENSMUST00000158648 279 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm8224-201ENSMUST00000166178 497 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm21638-201ENSMUST00000179473 836 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm19427-201ENSMUST00000183619 208 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm23925-202ENSMUST00000188429 132 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm43304-201ENSMUST00000196803 326 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm44011-201ENSMUST00000203336 394 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm44609-201ENSMUST00000207157 460 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm7675-201ENSMUST00000208828 686 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm18507-201ENSMUST00000218855 525 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm26121-201ENSMUST00000083364 162 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm22826-201ENSMUST00000083774 165 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Ssrp1Q08943 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm11367-201ENSMUST00000117802 120 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm14364-201ENSMUST00000129209 267 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm25909-201ENSMUST00000157619 121 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm24853-201ENSMUST00000158026 121 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm26983-201ENSMUST00000182051 388 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm27940-201ENSMUST00000184449 98 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm21856-201ENSMUST00000187547 696 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm21735-201ENSMUST00000190360 696 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm38329-201ENSMUST00000193473 427 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm37732-201ENSMUST00000194377 316 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm43586-201ENSMUST00000195948 310 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Gm44543-201ENSMUST00000209136 396 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.87□□□□□ -1.63
Ssrp1Q08943 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.87□□□□□ -1.63
Ssrp1Q08943 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms