Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4□□□□□ -1.77
CiitaP79621 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CiitaP79621 Gm45327-201ENSMUST00000211612 565 ntBASIC4□□□□□ -1.77
CiitaP79621 AC152415.1-201ENSMUST00000213320 440 ntBASIC4□□□□□ -1.77
CiitaP79621 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4□□□□□ -1.77
CiitaP79621 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4□□□□□ -1.77
CiitaP79621 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4□□□□□ -1.77
CiitaP79621 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC4□□□□□ -1.77
CiitaP79621 CT030184.1-201ENSMUST00000222393 416 ntBASIC4□□□□□ -1.77
CiitaP79621 AC134254.5-201ENSMUST00000223436 400 ntBASIC4□□□□□ -1.77
CiitaP79621 AC118006.1-201ENSMUST00000224211 501 ntBASIC4□□□□□ -1.77
CiitaP79621 AC158142.2-201ENSMUST00000227892 635 ntBASIC4□□□□□ -1.77
CiitaP79621 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
CiitaP79621 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4□□□□□ -1.77
CiitaP79621 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4□□□□□ -1.77
CiitaP79621 n-R5s220-201ENSMUST00000082926 120 ntBASIC4□□□□□ -1.77
CiitaP79621 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4□□□□□ -1.77
CiitaP79621 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CiitaP79621 Gm14404-201ENSMUST00000119117 1660 ntBASIC4□□□□□ -1.77
CiitaP79621 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CiitaP79621 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CiitaP79621 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CiitaP79621 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CiitaP79621 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 Gm24120-201ENSMUST00000103978 129 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm14880-201ENSMUST00000117581 292 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm11923-201ENSMUST00000118135 508 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm15025-201ENSMUST00000118434 418 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm13640-201ENSMUST00000118445 264 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm16412-201ENSMUST00000121602 273 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm25102-201ENSMUST00000122479 112 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm24059-201ENSMUST00000157493 312 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm23666-201ENSMUST00000158053 116 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm10177-202ENSMUST00000161698 207 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm17154-201ENSMUST00000165748 431 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.99□□□□□ -1.77
CiitaP79621 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm29640-201ENSMUST00000187972 278 ntBASIC3.99□□□□□ -1.77
CiitaP79621 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 Gm28926-201ENSMUST00000191063 680 ntBASIC3.99□□□□□ -1.77
CiitaP79621 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 Gm6680-201ENSMUST00000192789 950 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Trbv8-201ENSMUST00000194020 285 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Gm9722-201ENSMUST00000194568 802 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CiitaP79621 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.99□□□□□ -1.77
CiitaP79621 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CiitaP79621 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.99□□□□□ -1.77
CiitaP79621 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.99□□□□□ -1.77
CiitaP79621 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CiitaP79621 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CiitaP79621 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CiitaP79621 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.99□□□□□ -1.77
CiitaP79621 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CiitaP79621 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CiitaP79621 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CiitaP79621 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CiitaP79621 Gm26377-201ENSMUST00000102184 108 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CiitaP79621 Gm6664-201ENSMUST00000119138 468 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm12543-201ENSMUST00000120410 543 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm12998-201ENSMUST00000122445 789 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.98□□□□□ -1.77
CiitaP79621 Gm25667-201ENSMUST00000157701 275 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm22890-201ENSMUST00000158642 144 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CiitaP79621 Mir6938-201ENSMUST00000184173 63 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CiitaP79621 Gm38329-201ENSMUST00000193473 427 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CiitaP79621 Gm2314-201ENSMUST00000200391 586 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.98□□□□□ -1.77
CiitaP79621 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm45245-201ENSMUST00000210082 376 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm35857-201ENSMUST00000212739 178 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.98□□□□□ -1.77
CiitaP79621 Olfr936-202ENSMUST00000216912 937 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CiitaP79621 Gm5175-202ENSMUST00000219699 529 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm18116-201ENSMUST00000220920 537 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CiitaP79621 Snora7a-201ENSMUST00000082629 140 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Gm22578-201ENSMUST00000083730 107 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.98□□□□□ -1.77
CiitaP79621 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CiitaP79621 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CiitaP79621 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms