Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm12782-201ENSMUST00000117519 727 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Tnfsf4P43488 Gm14506-201ENSMUST00000121165 536 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Gm12693-201ENSMUST00000121965 483 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.58□□□□□ -2
Tnfsf4P43488 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.58□□□□□ -2
Tnfsf4P43488 Gm24879-201ENSMUST00000158386 143 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Tnfsf4P43488 Gm18346-201ENSMUST00000216782 325 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Gm18899-201ENSMUST00000217663 546 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf4P43488 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Tnfsf4P43488 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Tnfsf4P43488 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Tnfsf4P43488 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.58□□□□□ -2
Tnfsf4P43488 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf4P43488 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Tnfsf4P43488 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Tnfsf4P43488 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm25308-201ENSMUST00000104171 158 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm14253-201ENSMUST00000122112 639 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm22277-201ENSMUST00000157204 277 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm23234-201ENSMUST00000157304 134 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm23116-201ENSMUST00000158481 67 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm23505-201ENSMUST00000158989 130 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm29658-201ENSMUST00000185404 230 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm44349-201ENSMUST00000197048 123 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm44060-201ENSMUST00000204440 410 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm36247-201ENSMUST00000211834 285 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.57□□□□□ -2
Tnfsf4P43488 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm9370-201ENSMUST00000222787 609 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Gm10088-201ENSMUST00000074116 423 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Tnfsf4P43488 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.57□□□□□ -2
Tnfsf4P43488 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Tnfsf4P43488 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.56□□□□□ -2
Tnfsf4P43488 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.56□□□□□ -2
Tnfsf4P43488 Gm23168-201ENSMUST00000157156 143 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm24061-201ENSMUST00000157489 120 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm26045-201ENSMUST00000157862 97 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm24965-201ENSMUST00000157922 106 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm23380-201ENSMUST00000158448 103 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm20526-201ENSMUST00000173416 158 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 Gm27733-201ENSMUST00000184803 68 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC2.56□□□□□ -2
Tnfsf4P43488 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms