Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm24950-201ENSMUST00000082768 191 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm23971-201ENSMUST00000083317 191 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm23849-201ENSMUST00000083833 191 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm26316-201ENSMUST00000083886 191 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Traf1P39428 Gm25764-201ENSMUST00000104092 134 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Traf1P39428 Gm13650-201ENSMUST00000117729 433 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm15026-201ENSMUST00000119219 458 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm15060-201ENSMUST00000119550 948 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm12515-201ENSMUST00000120116 361 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.18□□□□□ -1.74
Traf1P39428 Gm23326-201ENSMUST00000157419 105 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm23123-201ENSMUST00000157648 144 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm24008-201ENSMUST00000157733 138 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm25883-201ENSMUST00000157781 271 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm24727-201ENSMUST00000158231 144 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.18□□□□□ -1.74
Traf1P39428 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Traf1P39428 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.18□□□□□ -1.74
Traf1P39428 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Traf1P39428 Gm37097-201ENSMUST00000193676 336 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm43704-201ENSMUST00000196164 496 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Trav12-4-201ENSMUST00000200663 271 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm44058-201ENSMUST00000204335 467 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Gm44554-201ENSMUST00000208738 147 ntBASIC4.18□□□□□ -1.74
Traf1P39428 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.18□□□□□ -1.74
Traf1P39428 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Traf1P39428 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.18□□□□□ -1.74
Traf1P39428 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Traf1P39428 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Traf1P39428 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.18□□□□□ -1.74
Traf1P39428 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Traf1P39428 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Traf1P39428 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Traf1P39428 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Traf1P39428 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Traf1P39428 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Traf1P39428 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Traf1P39428 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Traf1P39428 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm14768-201ENSMUST00000122126 678 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm22960-201ENSMUST00000122517 104 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm16363-201ENSMUST00000132460 877 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.17□□□□□ -1.74
Traf1P39428 Gm23754-201ENSMUST00000157576 63 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm23666-201ENSMUST00000158053 116 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Mir6408-201ENSMUST00000183643 91 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm34091-201ENSMUST00000200875 604 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.17□□□□□ -1.74
Traf1P39428 Gm45316-201ENSMUST00000210128 162 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Gm17911-201ENSMUST00000210806 877 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.17□□□□□ -1.74
Traf1P39428 AC115357.1-201ENSMUST00000227575 466 ntBASIC4.17□□□□□ -1.74
Traf1P39428 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.17□□□□□ -1.74
Traf1P39428 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.17□□□□□ -1.74
Traf1P39428 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Traf1P39428 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Traf1P39428 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Traf1P39428 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Traf1P39428 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Traf1P39428 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Traf1P39428 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Traf1P39428 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Traf1P39428 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Traf1P39428 Gm14627-201ENSMUST00000118931 567 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm22988-201ENSMUST00000122759 144 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.16□□□□□ -1.74
Traf1P39428 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm23602-201ENSMUST00000157258 132 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm25977-201ENSMUST00000158697 85 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms