Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm18507-201ENSMUST00000218855 525 ntBASIC4.09□□□□□ -1.75
RxraP28700 Gm7753-201ENSMUST00000221007 867 ntBASIC4.09□□□□□ -1.75
RxraP28700 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.09□□□□□ -1.75
RxraP28700 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RxraP28700 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RxraP28700 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.09□□□□□ -1.75
RxraP28700 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.09□□□□□ -1.75
RxraP28700 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
RxraP28700 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RxraP28700 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RxraP28700 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RxraP28700 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.09□□□□□ -1.76
RxraP28700 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RxraP28700 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 Gm23063-201ENSMUST00000102350 93 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm14628-201ENSMUST00000117508 635 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm11869-201ENSMUST00000118701 329 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm13239-201ENSMUST00000119920 637 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm23463-201ENSMUST00000122468 99 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm4916-201ENSMUST00000126139 642 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.08□□□□□ -1.76
RxraP28700 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.08□□□□□ -1.76
RxraP28700 Gm22733-201ENSMUST00000158094 91 ntBASIC4.08□□□□□ -1.76
RxraP28700 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RxraP28700 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm24968-201ENSMUST00000179817 107 ntBASIC4.08□□□□□ -1.76
RxraP28700 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
RxraP28700 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
RxraP28700 Gm27875-201ENSMUST00000184425 123 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.08□□□□□ -1.76
RxraP28700 Gm28623-201ENSMUST00000187219 192 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm43541-201ENSMUST00000197208 581 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.08□□□□□ -1.76
RxraP28700 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm2314-201ENSMUST00000200391 586 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm43232-201ENSMUST00000201346 364 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.08□□□□□ -1.76
RxraP28700 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm18903-201ENSMUST00000215343 480 ntBASIC4.08□□□□□ -1.76
RxraP28700 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.08□□□□□ -1.76
RxraP28700 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.08□□□□□ -1.76
RxraP28700 Gm18116-201ENSMUST00000220920 537 ntBASIC4.08□□□□□ -1.76
RxraP28700 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.08□□□□□ -1.76
RxraP28700 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RxraP28700 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 Gm26128-201ENSMUST00000083170 110 ntBASIC4.08□□□□□ -1.76
RxraP28700 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.08□□□□□ -1.76
RxraP28700 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RxraP28700 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RxraP28700 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.08□□□□□ -1.76
RxraP28700 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.08□□□□□ -1.76
RxraP28700 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RxraP28700 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.07□□□□□ -1.76
RxraP28700 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RxraP28700 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RxraP28700 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RxraP28700 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RxraP28700 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RxraP28700 Gm22472-201ENSMUST00000104115 134 ntBASIC4.07□□□□□ -1.76
RxraP28700 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.07□□□□□ -1.76
RxraP28700 Gm8666-201ENSMUST00000117517 292 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm15060-201ENSMUST00000119550 948 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm12190-201ENSMUST00000120001 187 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm25177-201ENSMUST00000122634 117 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm16274-201ENSMUST00000139251 592 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm26036-201ENSMUST00000158149 144 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm22765-201ENSMUST00000158371 128 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm26171-201ENSMUST00000158422 131 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm23352-201ENSMUST00000158428 64 ntBASIC4.07□□□□□ -1.76
RxraP28700 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm17155-201ENSMUST00000165969 473 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.07□□□□□ -1.76
RxraP28700 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.07□□□□□ -1.76
RxraP28700 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RxraP28700 Gm28666-201ENSMUST00000186649 274 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.07□□□□□ -1.76
RxraP28700 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RxraP28700 Gm17887-201ENSMUST00000200194 547 ntBASIC4.07□□□□□ -1.76
RxraP28700 Gm4045-201ENSMUST00000204076 310 ntBASIC4.07□□□□□ -1.76
RxraP28700 AC120394.1-201ENSMUST00000217153 351 ntBASIC4.07□□□□□ -1.76
RxraP28700 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.07□□□□□ -1.76
RxraP28700 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.07□□□□□ -1.76
RxraP28700 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.07□□□□□ -1.76
RxraP28700 AC168059.2-201ENSMUST00000224473 333 ntBASIC4.07□□□□□ -1.76
RxraP28700 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RxraP28700 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms