Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RaraP11416 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.35□□□□□ -1.55
RaraP11416 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RaraP11416 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.35□□□□□ -1.55
RaraP11416 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RaraP11416 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RaraP11416 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RaraP11416 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RaraP11416 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Gm22488-201ENSMUST00000116811 127 ntBASIC5.34□□□□□ -1.55
RaraP11416 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm14521-201ENSMUST00000119545 350 ntBASIC5.34□□□□□ -1.55
RaraP11416 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm12771-201ENSMUST00000120246 135 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm22106-201ENSMUST00000122544 127 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RaraP11416 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RaraP11416 Gm26622-201ENSMUST00000180520 298 ntBASIC5.34□□□□□ -1.55
RaraP11416 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Mir7006-201ENSMUST00000183624 69 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm29397-201ENSMUST00000185205 333 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm28255-201ENSMUST00000187101 694 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm43286-201ENSMUST00000197420 424 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm42458-201ENSMUST00000201914 369 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.34□□□□□ -1.55
RaraP11416 Gm44261-201ENSMUST00000203337 209 ntBASIC5.34□□□□□ -1.55
RaraP11416 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RaraP11416 Gm44817-201ENSMUST00000205416 453 ntBASIC5.34□□□□□ -1.55
RaraP11416 Gm45119-201ENSMUST00000207612 199 ntBASIC5.34□□□□□ -1.55
RaraP11416 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.34□□□□□ -1.55
RaraP11416 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.34□□□□□ -1.55
RaraP11416 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.34□□□□□ -1.55
RaraP11416 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.34□□□□□ -1.55
RaraP11416 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RaraP11416 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RaraP11416 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.34□□□□□ -1.56
RaraP11416 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.34□□□□□ -1.56
RaraP11416 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RaraP11416 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RaraP11416 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RaraP11416 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.33□□□□□ -1.56
RaraP11416 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Gm24230-201ENSMUST00000104313 129 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm13321-201ENSMUST00000117101 400 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm14706-201ENSMUST00000117744 255 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm12564-201ENSMUST00000119860 321 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm7327-201ENSMUST00000120925 652 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RaraP11416 Gm22219-201ENSMUST00000157562 319 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm23121-201ENSMUST00000157653 173 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm22312-201ENSMUST00000158005 130 ntBASIC5.33□□□□□ -1.56
RaraP11416 Scarna6-201ENSMUST00000158656 265 ntBASIC5.33□□□□□ -1.56
RaraP11416 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.33□□□□□ -1.56
RaraP11416 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Gm28389-201ENSMUST00000190090 697 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm29334-201ENSMUST00000190334 357 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm19498-201ENSMUST00000191128 331 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm6112-201ENSMUST00000208037 629 ntBASIC5.33□□□□□ -1.56
RaraP11416 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.33□□□□□ -1.56
RaraP11416 Gm45313-201ENSMUST00000210584 178 ntBASIC5.33□□□□□ -1.56
RaraP11416 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.33□□□□□ -1.56
RaraP11416 AC122225.1-201ENSMUST00000215641 369 ntBASIC5.33□□□□□ -1.56
RaraP11416 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.33□□□□□ -1.56
RaraP11416 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.33□□□□□ -1.56
RaraP11416 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.33□□□□□ -1.56
RaraP11416 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.33□□□□□ -1.56
RaraP11416 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.33□□□□□ -1.56
RaraP11416 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
RaraP11416 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RaraP11416 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
RaraP11416 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.32□□□□□ -1.56
RaraP11416 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RaraP11416 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.32□□□□□ -1.56
RaraP11416 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm14601-201ENSMUST00000120892 236 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm14977-201ENSMUST00000121626 812 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm11200-201ENSMUST00000121698 448 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm22343-201ENSMUST00000122648 286 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.32□□□□□ -1.56
RaraP11416 Gm26278-201ENSMUST00000157098 132 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm22277-201ENSMUST00000157204 277 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm23262-201ENSMUST00000158323 168 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms