Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23098-201ENSMUST00000157552 299 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm22156-201ENSMUST00000158409 141 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm17155-201ENSMUST00000165969 473 ntBASIC3.69□□□□□ -1.82
Lire1P11260 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lire1P11260 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm27599-201ENSMUST00000183758 174 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm28069-201ENSMUST00000189926 214 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lire1P11260 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.69□□□□□ -1.82
Lire1P11260 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lire1P11260 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lire1P11260 Gm25126-201ENSMUST00000083343 102 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm21286-201ENSMUST00000098035 545 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lire1P11260 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lire1P11260 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lire1P11260 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.68□□□□□ -1.82
Lire1P11260 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Gm15399-201ENSMUST00000118055 724 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm11356-201ENSMUST00000118974 192 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm7219-201ENSMUST00000119619 297 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Clec2f-201ENSMUST00000121051 374 ntBASIC3.68□□□□□ -1.82
Lire1P11260 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm22225-201ENSMUST00000157358 278 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm23365-201ENSMUST00000175019 125 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm25960-201ENSMUST00000175110 125 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm44453-201ENSMUST00000175161 126 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Mir3106-201ENSMUST00000175401 82 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm25195-201ENSMUST00000177656 126 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm26960-201ENSMUST00000182263 412 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Gm19540-201ENSMUST00000221843 810 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.68□□□□□ -1.82
Lire1P11260 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lire1P11260 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lire1P11260 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lire1P11260 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.68□□□□□ -1.82
Lire1P11260 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.68□□□□□ -1.82
Lire1P11260 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lire1P11260 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lire1P11260 Gm25833-201ENSMUST00000104137 133 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Gm13329-201ENSMUST00000117063 265 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm15025-201ENSMUST00000118434 418 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm15014-201ENSMUST00000120742 258 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm24998-201ENSMUST00000157908 89 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm22769-201ENSMUST00000158367 98 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm23473-201ENSMUST00000158883 116 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.67□□□□□ -1.82
Lire1P11260 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm25999-201ENSMUST00000175398 133 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Gm24968-201ENSMUST00000179817 107 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Mir6338-201ENSMUST00000183389 109 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Mir7658-201ENSMUST00000184043 57 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Gm18551-201ENSMUST00000195594 642 ntBASIC3.67□□□□□ -1.82
Lire1P11260 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm43228-201ENSMUST00000200735 264 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm44223-201ENSMUST00000204854 114 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm8132-201ENSMUST00000204938 640 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.67□□□□□ -1.82
Lire1P11260 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.67□□□□□ -1.82
Lire1P11260 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.67□□□□□ -1.82
Lire1P11260 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.67□□□□□ -1.82
Lire1P11260 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lire1P11260 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Lire1P11260 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lire1P11260 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Lire1P11260 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms