Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm43746-201ENSMUST00000200028 317 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm29815-201ENSMUST00000202418 178 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm45189-201ENSMUST00000208567 363 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm45588-201ENSMUST00000211213 630 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Hmgb3O54879 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm21007-201ENSMUST00000221024 326 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm7119-201ENSMUST00000221345 695 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 AC132315.1-201ENSMUST00000221771 390 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Hmgb3O54879 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Hmgb3O54879 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Hmgb3O54879 Gm5185-201ENSMUST00000080271 619 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.37□□□□□ -2.03
Hmgb3O54879 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Hmgb3O54879 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Mir499-201ENSMUST00000102357 79 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm14981-201ENSMUST00000117325 943 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm11356-201ENSMUST00000118974 192 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm25605-201ENSMUST00000158364 124 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm17194-201ENSMUST00000164610 348 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm27921-201ENSMUST00000183968 108 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Mir6385-201ENSMUST00000184295 105 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm37007-201ENSMUST00000194234 319 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm43308-201ENSMUST00000197236 373 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm25203-202ENSMUST00000200458 216 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm43384-201ENSMUST00000200569 637 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm43991-201ENSMUST00000203751 274 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm45742-201ENSMUST00000212400 433 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm7751-201ENSMUST00000212868 709 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC2.36□□□□□ -2.03
Hmgb3O54879 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm25203-201ENSMUST00000082842 215 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Gm25005-201ENSMUST00000083812 156 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Hmgb3O54879 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.36□□□□□ -2.03
Hmgb3O54879 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Hmgb3O54879 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Hmgb3O54879 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm23942-201ENSMUST00000101956 107 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm14987-201ENSMUST00000117820 676 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm14562-201ENSMUST00000129885 543 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm23895-201ENSMUST00000158108 160 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Mir1934-201ENSMUST00000158127 83 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm21893-201ENSMUST00000179119 397 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm26915-201ENSMUST00000183080 748 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm29553-201ENSMUST00000189692 279 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm42818-201ENSMUST00000198869 987 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm7639-201ENSMUST00000212608 484 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.35□□□□□ -2.03
Hmgb3O54879 AC158523.2-201ENSMUST00000222708 548 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Hmgb3O54879 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.35□□□□□ -2.03
Hmgb3O54879 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Hmgb3O54879 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Hmgb3O54879 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm12492-201ENSMUST00000117665 564 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm14142-201ENSMUST00000117833 296 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm2066-201ENSMUST00000118046 389 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm2318-201ENSMUST00000119623 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm2005-201ENSMUST00000120759 542 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm11456-201ENSMUST00000121070 256 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms