Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Gm13314-201ENSMUST00000118742 335 ntBASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Mir3106-201ENSMUST00000175401 82 ntBASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 AC124400.1-201ENSMUST00000225779 193 ntBASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc180J3QNE4 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm16171-201ENSMUST00000118004 324 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm15854-201ENSMUST00000118879 808 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm650-201ENSMUST00000144428 1551 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm22666-201ENSMUST00000158717 164 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm8580-201ENSMUST00000160295 464 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm28625-201ENSMUST00000188309 205 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC4.79□□□□□ -1.64
Ccdc180J3QNE4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 AC154297.1-201ENSMUST00000171334 397 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Gm20542-201ENSMUST00000174582 372 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Gm28594-201ENSMUST00000187022 661 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.78□□□□□ -1.64
Ccdc180J3QNE4 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm12515-201ENSMUST00000120116 361 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm7258-201ENSMUST00000179317 300 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm26622-201ENSMUST00000180520 298 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm43704-201ENSMUST00000196164 496 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm45072-201ENSMUST00000208673 929 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm43879-201ENSMUST00000203811 3760 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm16533-201ENSMUST00000140035 228 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm15974-201ENSMUST00000159103 531 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm16569-201ENSMUST00000160526 314 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc180J3QNE4 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Gm13329-201ENSMUST00000117063 265 ntBASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc180J3QNE4 Gm13756-201ENSMUST00000117618 222 ntBASIC4.75□□□□□ -1.65
Ccdc180J3QNE4 Gm23889-201ENSMUST00000122689 104 ntBASIC4.75□□□□□ -1.65
Ccdc180J3QNE4 Gm23264-201ENSMUST00000083372 107 ntBASIC4.75□□□□□ -1.65
Ccdc180J3QNE4 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc180J3QNE4 Gm14125-201ENSMUST00000113442 680 ntBASIC4.74□□□□□ -1.65
Ccdc180J3QNE4 Gm15244-201ENSMUST00000121122 130 ntBASIC4.74□□□□□ -1.65
Ccdc180J3QNE4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc180J3QNE4 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc180J3QNE4 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc180J3QNE4 Gm15933-201ENSMUST00000117215 616 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm13555-201ENSMUST00000121668 319 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Snord21-201ENSMUST00000082519 94 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm24670-201ENSMUST00000104154 132 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm9427-201ENSMUST00000116187 651 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm3757-201ENSMUST00000125878 675 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm22730-201ENSMUST00000158085 171 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm27163-201ENSMUST00000184767 409 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Gm18193-201ENSMUST00000210017 772 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc180J3QNE4 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc180J3QNE4 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.72□□□□□ -1.65
Ccdc180J3QNE4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc180J3QNE4 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Ccdc180J3QNE4 Gm23424-201ENSMUST00000103889 110 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms