Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm19147-201ENSMUST00000199622 652 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 Gm44816-201ENSMUST00000206666 477 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 Gm45438-201ENSMUST00000210242 564 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 Gm20102-201ENSMUST00000222445 220 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
NpcdF8VQB8 Gm10042-201ENSMUST00000079884 78 ntBASIC5.73□□□□□ -1.49
NpcdF8VQB8 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NpcdF8VQB8 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NpcdF8VQB8 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NpcdF8VQB8 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NpcdF8VQB8 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm13672-201ENSMUST00000117554 459 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm14560-201ENSMUST00000118672 375 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm13228-201ENSMUST00000118937 634 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm15012-201ENSMUST00000119176 106 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm14852-201ENSMUST00000120065 647 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm13867-201ENSMUST00000120844 395 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm23167-201ENSMUST00000157155 103 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm24439-201ENSMUST00000157894 117 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm17153-201ENSMUST00000171314 490 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm27818-201ENSMUST00000184536 159 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm6802-202ENSMUST00000186566 126 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NpcdF8VQB8 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.72□□□□□ -1.49
NpcdF8VQB8 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.72□□□□□ -1.49
NpcdF8VQB8 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NpcdF8VQB8 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
NpcdF8VQB8 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NpcdF8VQB8 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm14355-201ENSMUST00000117352 264 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm12787-201ENSMUST00000119234 396 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm13132-201ENSMUST00000121194 472 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm14333-201ENSMUST00000130484 264 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm24751-201ENSMUST00000157844 102 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm21978-201ENSMUST00000179696 377 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm10105-201ENSMUST00000184601 270 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm29031-201ENSMUST00000185316 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm29000-201ENSMUST00000185444 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28204-201ENSMUST00000185934 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28290-201ENSMUST00000186505 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28161-201ENSMUST00000186669 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28749-209ENSMUST00000189599 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28506-201ENSMUST00000189937 150 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm28408-201ENSMUST00000191557 463 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm38044-201ENSMUST00000192964 487 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm2147-201ENSMUST00000193588 639 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Trbv11-201ENSMUST00000194354 260 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm33163-201ENSMUST00000194504 614 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm8874-201ENSMUST00000196826 286 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm43968-201ENSMUST00000203388 389 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm44161-201ENSMUST00000203532 253 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 AC101984.1-201ENSMUST00000219639 402 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NpcdF8VQB8 Gm26165-201ENSMUST00000083791 138 ntBASIC5.71□□□□□ -1.5
NpcdF8VQB8 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms