Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Shank1D3YZU1 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shank1D3YZU1 Mir190b-201ENSMUST00000104803 80 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm15994-201ENSMUST00000118029 402 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm12902-201ENSMUST00000118389 322 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm2318-201ENSMUST00000119623 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm2768-201ENSMUST00000121062 250 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm23032-201ENSMUST00000157995 107 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm24211-201ENSMUST00000158264 107 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm26271-201ENSMUST00000158349 104 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm17054-201ENSMUST00000169811 259 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm27903-201ENSMUST00000175482 126 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm20693-201ENSMUST00000177431 211 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7438-201ENSMUST00000177664 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7408-201ENSMUST00000178014 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7386-201ENSMUST00000178020 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm3657-201ENSMUST00000178170 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7415-201ENSMUST00000178205 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7398-201ENSMUST00000178589 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7391-201ENSMUST00000178680 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm7375-201ENSMUST00000179232 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm3681-201ENSMUST00000179940 639 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm26991-201ENSMUST00000180950 620 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm27538-201ENSMUST00000185065 294 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm17929-201ENSMUST00000186851 627 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm36934-201ENSMUST00000192007 306 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm24928-201ENSMUST00000083399 107 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm25897-201ENSMUST00000083709 107 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm11262-201ENSMUST00000119326 833 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm14977-201ENSMUST00000121626 812 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm22322-201ENSMUST00000157151 111 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm26173-201ENSMUST00000158416 136 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm9593-201ENSMUST00000166034 469 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm20415-201ENSMUST00000172877 423 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Mir7k-201ENSMUST00000184115 110 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm29259-201ENSMUST00000186396 694 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm28956-201ENSMUST00000189047 427 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm38261-201ENSMUST00000192608 316 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm25586-201ENSMUST00000082499 112 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.29□□□□□ -1.88
Shank1D3YZU1 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Shank1D3YZU1 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Shank1D3YZU1 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.28□□□□□ -1.88
Shank1D3YZU1 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shank1D3YZU1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shank1D3YZU1 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Shank1D3YZU1 Gm11566-201ENSMUST00000118550 203 ntBASIC3.28□□□□□ -1.88
Shank1D3YZU1 Gm15986-201ENSMUST00000122153 400 ntBASIC3.28□□□□□ -1.88
Shank1D3YZU1 Gm11834-201ENSMUST00000122257 585 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms