Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm27445-201ENSMUST00000184484 72 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm43198-201ENSMUST00000200927 326 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm19253-201ENSMUST00000204279 307 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm6112-201ENSMUST00000208037 629 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm45658-201ENSMUST00000209197 580 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm18388-201ENSMUST00000222339 557 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm24446-201ENSMUST00000083982 156 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr203-201ENSMUST00000089305 924 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm23133-201ENSMUST00000104255 135 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm22194-201ENSMUST00000116869 95 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm14103-201ENSMUST00000119075 366 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm5942-201ENSMUST00000120046 439 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm14577-201ENSMUST00000121134 256 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm11403-201ENSMUST00000122195 369 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm23023-201ENSMUST00000158767 109 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Mir6393-201ENSMUST00000183709 94 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm28648-201ENSMUST00000190092 343 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm37946-201ENSMUST00000192064 347 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm43214-201ENSMUST00000199242 352 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm44348-201ENSMUST00000200165 122 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm44449-201ENSMUST00000203610 153 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm45690-201ENSMUST00000210775 246 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm35262-201ENSMUST00000215133 267 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Gm25404-201ENSMUST00000082970 107 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb1S4R1E0 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm24281-201ENSMUST00000104234 136 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Mir208b-201ENSMUST00000104735 77 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm16082-201ENSMUST00000115992 377 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Mir467h-201ENSMUST00000116759 121 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm13122-201ENSMUST00000118380 453 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm22960-201ENSMUST00000122517 104 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm6058-201ENSMUST00000154261 399 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm26271-201ENSMUST00000158349 104 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm2855-201ENSMUST00000166765 456 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm10067-201ENSMUST00000179462 348 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm11394-201ENSMUST00000181421 517 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms