Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Gm23128-201ENSMUST00000104257 132 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Gm38080-201ENSMUST00000194035 268 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Gm37807-201ENSMUST00000194310 190 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Gm23128-202ENSMUST00000196578 133 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scn8aQ9WTU3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm15148-201ENSMUST00000117602 156 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm26041-201ENSMUST00000158148 108 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm16111-201ENSMUST00000162128 285 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm19039-201ENSMUST00000204363 575 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Gm30674-201ENSMUST00000214523 392 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Scn8aQ9WTU3 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm14877-201ENSMUST00000119803 478 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm22600-201ENSMUST00000157598 269 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm23152-201ENSMUST00000175322 116 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm27796-201ENSMUST00000183863 261 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm7837-201ENSMUST00000190873 412 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm19080-201ENSMUST00000196082 550 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm44208-201ENSMUST00000205199 421 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm6842-201ENSMUST00000211361 390 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm2436-201ENSMUST00000219562 774 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Gm25202-201ENSMUST00000082838 191 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Snord7-201ENSMUST00000083781 97 ntBASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Scn8aQ9WTU3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm26342-201ENSMUST00000104557 129 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm23179-201ENSMUST00000158693 304 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm8224-201ENSMUST00000166178 497 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm25025-201ENSMUST00000175018 111 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm28639-201ENSMUST00000191519 481 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm43369-201ENSMUST00000196373 1552 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Gm18445-201ENSMUST00000195502 774 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.76□□□□□ -1.97
Scn8aQ9WTU3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm23585-201ENSMUST00000157656 102 ntBASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm23895-201ENSMUST00000158108 160 ntBASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm24876-201ENSMUST00000158780 92 ntBASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm29281-201ENSMUST00000188077 381 ntBASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 Gm44256-201ENSMUST00000203304 335 ntBASIC2.75□□□□□ -1.97
Scn8aQ9WTU3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms