Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm23736-201ENSMUST00000082553 75 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm25403-201ENSMUST00000082971 143 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 AF357341-201ENSMUST00000083088 75 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Mir294-201ENSMUST00000104710 84 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm14879-201ENSMUST00000117308 507 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm14607-201ENSMUST00000119119 491 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm15026-201ENSMUST00000119219 458 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm16363-201ENSMUST00000132460 877 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm16236-201ENSMUST00000159588 379 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm17204-201ENSMUST00000167936 478 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm29460-201ENSMUST00000188607 714 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm9632-201ENSMUST00000195934 643 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm43493-201ENSMUST00000199837 202 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm44348-201ENSMUST00000200165 122 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm43992-201ENSMUST00000204358 197 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm45380-201ENSMUST00000210465 315 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm45778-201ENSMUST00000211959 153 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm18903-201ENSMUST00000215343 480 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Gm19219-201ENSMUST00000215863 724 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim3Q9R1R2 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Mir592-201ENSMUST00000102113 96 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm25727-201ENSMUST00000104522 131 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm12543-201ENSMUST00000120410 543 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm15719-201ENSMUST00000120619 635 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm23602-201ENSMUST00000157258 132 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm22776-201ENSMUST00000178634 94 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm23767-201ENSMUST00000179278 94 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm43228-201ENSMUST00000200735 264 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm44294-201ENSMUST00000205090 728 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm18644-201ENSMUST00000211458 815 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm45327-201ENSMUST00000211612 565 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm45696-201ENSMUST00000212088 985 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm9628-201ENSMUST00000222169 725 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 LOC667541-201ENSMUST00000223408 278 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms