Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm28552-201ENSMUST00000190725 388 ntBASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.22□□□□□ -1.41
Msh5Q9QUM7 AC172751.1-201ENSMUST00000226887 440 ntBASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 AC164164.1-201ENSMUST00000223245 2340 ntBASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh5Q9QUM7 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Msh5Q9QUM7 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Msh5Q9QUM7 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Msh5Q9QUM7 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Msh5Q9QUM7 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Msh5Q9QUM7 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm22373-201ENSMUST00000104584 89 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm12929-201ENSMUST00000122406 370 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm22447-201ENSMUST00000158155 92 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm26403-201ENSMUST00000158500 105 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm16490-201ENSMUST00000165299 351 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm22917-201ENSMUST00000180116 110 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm28883-201ENSMUST00000189256 369 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm8599-201ENSMUST00000193033 457 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm43746-201ENSMUST00000200028 317 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm43105-201ENSMUST00000202987 459 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.21□□□□□ -1.42
Msh5Q9QUM7 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.21□□□□□ -1.42
Msh5Q9QUM7 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm28634-201ENSMUST00000191087 2613 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm12653-201ENSMUST00000117778 561 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm8595-201ENSMUST00000118250 630 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm13818-201ENSMUST00000119441 511 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm12399-201ENSMUST00000121475 446 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm6762-201ENSMUST00000121769 289 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm4916-201ENSMUST00000126139 642 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm26353-201ENSMUST00000158224 255 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm18520-201ENSMUST00000174783 658 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm24155-201ENSMUST00000175259 110 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm43354-201ENSMUST00000196862 346 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm18540-201ENSMUST00000204025 526 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 AC156559.1-201ENSMUST00000224158 222 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm10108-201ENSMUST00000078246 319 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.2□□□□□ -1.42
Msh5Q9QUM7 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm25346-201ENSMUST00000104509 128 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm24069-201ENSMUST00000104512 127 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm26162-201ENSMUST00000157793 132 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm25374-201ENSMUST00000158158 101 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm25904-201ENSMUST00000158491 143 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm17511-201ENSMUST00000172206 342 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm4152-201ENSMUST00000172675 259 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Mir5107-201ENSMUST00000175586 88 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 Gm17887-201ENSMUST00000200194 547 ntBASIC6.19□□□□□ -1.42
Msh5Q9QUM7 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms