Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm22591-201ENSMUST00000104243 106 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm5060-201ENSMUST00000120072 599 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm2005-201ENSMUST00000120759 542 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm14649-201ENSMUST00000121814 324 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm25318-201ENSMUST00000122554 314 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm22792-201ENSMUST00000157225 133 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm3111-201ENSMUST00000167426 490 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Mir5098-201ENSMUST00000175320 82 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm18396-201ENSMUST00000177095 361 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm14527-201ENSMUST00000179300 639 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Mir6385-201ENSMUST00000184295 105 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm29600-201ENSMUST00000188687 377 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm37603-201ENSMUST00000192368 219 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm44371-201ENSMUST00000204148 467 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm45006-201ENSMUST00000206078 690 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm17991-201ENSMUST00000208139 297 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm45162-201ENSMUST00000209013 618 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm7380-201ENSMUST00000211599 466 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm45735-201ENSMUST00000212779 319 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim54Q9ERP3 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm12509-201ENSMUST00000118033 609 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm14887-201ENSMUST00000119522 663 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm13627-201ENSMUST00000119700 706 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm14417-201ENSMUST00000120036 1074 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm24537-201ENSMUST00000157950 102 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm25553-201ENSMUST00000158076 79 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm2862-201ENSMUST00000161524 328 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Mir3112-201ENSMUST00000175431 82 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm23648-201ENSMUST00000180301 107 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm26991-201ENSMUST00000180950 620 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Mir7j-201ENSMUST00000184427 122 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm43043-201ENSMUST00000196579 412 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm18429-201ENSMUST00000198707 421 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm2314-201ENSMUST00000200391 586 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm44990-201ENSMUST00000203922 217 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm45226-201ENSMUST00000206602 288 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm18414-201ENSMUST00000210858 694 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm6929-201ENSMUST00000210930 468 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AC170810.3-201ENSMUST00000226177 374 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm24150-201ENSMUST00000082759 104 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm23506-201ENSMUST00000083077 107 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms