Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.71□□□□□ -1.82
Cpsf1Q9EPU4 Gm45072-201ENSMUST00000208673 929 ntBASIC3.71□□□□□ -1.82
Cpsf1Q9EPU4 Gm45452-201ENSMUST00000210905 177 ntBASIC3.71□□□□□ -1.82
Cpsf1Q9EPU4 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.71□□□□□ -1.82
Cpsf1Q9EPU4 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cpsf1Q9EPU4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Cpsf1Q9EPU4 Mir682-201ENSMUST00000102281 96 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm11905-201ENSMUST00000117653 678 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Mir3076-201ENSMUST00000175415 60 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm27163-201ENSMUST00000184767 409 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Mir8090-201ENSMUST00000185078 136 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm25485-201ENSMUST00000104120 132 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gm24736-201ENSMUST00000158862 130 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.7□□□□□ -1.82
Cpsf1Q9EPU4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm15157-201ENSMUST00000121852 702 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm26277-201ENSMUST00000157097 152 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm25392-201ENSMUST00000157335 297 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm22500-201ENSMUST00000158982 99 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm27786-201ENSMUST00000184337 70 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Gm46996-201ENSMUST00000220924 408 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.69□□□□□ -1.82
Cpsf1Q9EPU4 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Gm26342-201ENSMUST00000104557 129 ntBASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Gm6565-201ENSMUST00000121217 438 ntBASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Gm23963-201ENSMUST00000179603 77 ntBASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Gm45678-201ENSMUST00000210509 295 ntBASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.68□□□□□ -1.82
Cpsf1Q9EPU4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm12849-201ENSMUST00000120013 739 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm5392-201ENSMUST00000122189 789 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm5268-201ENSMUST00000189212 940 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm19694-201ENSMUST00000192364 505 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm18602-201ENSMUST00000209794 851 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm45879-201ENSMUST00000212521 392 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf1Q9EPU4 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm14877-201ENSMUST00000119803 478 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm14821-201ENSMUST00000121975 435 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm6969-201ENSMUST00000140065 342 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm16236-201ENSMUST00000159588 379 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm24082-201ENSMUST00000175175 83 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm8392-201ENSMUST00000185647 835 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm29335-201ENSMUST00000188361 459 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm38075-201ENSMUST00000191979 920 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm26494-201ENSMUST00000083154 143 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm24493-201ENSMUST00000083805 143 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Cpsf1Q9EPU4 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.65□□□□□ -1.82
Cpsf1Q9EPU4 Gm17177-201ENSMUST00000169144 483 ntBASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Gm44519-201ENSMUST00000206486 122 ntBASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Gm45474-201ENSMUST00000209471 408 ntBASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms