Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm24831-201ENSMUST00000116778 126 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm14973-201ENSMUST00000117248 255 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm12125-201ENSMUST00000117261 736 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm13359-201ENSMUST00000119000 695 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm12515-201ENSMUST00000120116 361 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm16458-201ENSMUST00000121428 502 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm25198-201ENSMUST00000178574 110 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm4479-201ENSMUST00000178807 171 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm27249-201ENSMUST00000185049 328 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm29524-201ENSMUST00000190819 699 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm10237-201ENSMUST00000078393 273 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Snord35b-201ENSMUST00000082833 87 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdc40Q9DC48 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm12025-201ENSMUST00000117768 144 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm14681-201ENSMUST00000118047 411 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm12902-201ENSMUST00000118389 322 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm11708-201ENSMUST00000119530 832 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm14008-201ENSMUST00000120483 274 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm12313-201ENSMUST00000121347 421 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm26254-201ENSMUST00000122491 118 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm22561-201ENSMUST00000157331 84 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm23205-201ENSMUST00000158671 103 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm23312-201ENSMUST00000158774 102 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm4540-201ENSMUST00000170669 429 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm24520-201ENSMUST00000179510 110 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm29064-201ENSMUST00000187014 813 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm8242-202ENSMUST00000193056 475 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Trdv3-201ENSMUST00000198551 309 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm44348-201ENSMUST00000200165 122 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm44076-201ENSMUST00000203072 520 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm19253-201ENSMUST00000204279 307 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm18704-201ENSMUST00000219736 446 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm18363-201ENSMUST00000221671 730 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdc40Q9DC48 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.09□□□□□ -1.91
Cdc40Q9DC48 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cdc40Q9DC48 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cdc40Q9DC48 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cdc40Q9DC48 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm14537-201ENSMUST00000117464 599 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm6274-201ENSMUST00000118173 797 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm14253-201ENSMUST00000122112 639 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm23671-201ENSMUST00000157472 103 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm22516-201ENSMUST00000158266 124 ntBASIC3.08□□□□□ -1.92
Cdc40Q9DC48 Gm24875-201ENSMUST00000158888 104 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms