Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm11905-201ENSMUST00000117653 678 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm11843-201ENSMUST00000118984 425 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm13064-201ENSMUST00000119125 557 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm14907-201ENSMUST00000121948 854 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm25525-201ENSMUST00000177701 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm26178-201ENSMUST00000177706 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm4761-201ENSMUST00000178086 582 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm26465-201ENSMUST00000178517 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24317-201ENSMUST00000178536 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm25021-201ENSMUST00000179184 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm22995-201ENSMUST00000179670 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24424-201ENSMUST00000179714 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24389-201ENSMUST00000179962 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm25672-201ENSMUST00000180111 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm18505-201ENSMUST00000187360 790 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm29163-201ENSMUST00000188029 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37193-201ENSMUST00000193087 513 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm18433-202ENSMUST00000195682 196 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm43198-201ENSMUST00000200927 326 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm7726-201ENSMUST00000206241 231 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm23815-201ENSMUST00000083231 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm23520-201ENSMUST00000093736 107 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24715-201ENSMUST00000102377 95 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Mir291a-201ENSMUST00000104815 82 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm14253-201ENSMUST00000122112 639 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm23716-201ENSMUST00000157348 144 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24720-201ENSMUST00000157518 166 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm17075-201ENSMUST00000171924 670 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Mir8096-201ENSMUST00000184526 127 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37418-201ENSMUST00000195031 274 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm17917-201ENSMUST00000218561 953 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24144-201ENSMUST00000082632 111 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.03□□□□□ -1.92
Ccdc3Q9D6Y1 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm12090-201ENSMUST00000118692 758 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm14901-201ENSMUST00000119001 283 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm24914-201ENSMUST00000157285 313 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm25332-201ENSMUST00000158038 105 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm26214-201ENSMUST00000158581 107 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm25839-201ENSMUST00000158921 103 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm16569-201ENSMUST00000160526 314 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm26297-201ENSMUST00000179464 132 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm27308-201ENSMUST00000184807 233 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm28923-201ENSMUST00000187755 322 ntBASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc3Q9D6Y1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms