Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22120-201ENSMUST00000175590 70 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm26701-201ENSMUST00000181571 234 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm29408-201ENSMUST00000187536 216 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm38088-201ENSMUST00000195829 241 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm29754-201ENSMUST00000206269 358 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm18903-201ENSMUST00000215343 480 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm31849-201ENSMUST00000220306 375 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm23443-201ENSMUST00000082916 128 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Mir30e-201ENSMUST00000083475 92 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm26387-201ENSMUST00000104238 132 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm26418-201ENSMUST00000104275 137 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Mir294-201ENSMUST00000104710 84 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm12467-201ENSMUST00000117625 745 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm15364-201ENSMUST00000119618 585 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm11693-201ENSMUST00000119625 565 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm1866-201ENSMUST00000120701 477 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm24241-201ENSMUST00000157787 145 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm23782-201ENSMUST00000157939 120 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm6625-201ENSMUST00000177870 272 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm28594-201ENSMUST00000187022 661 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm28623-201ENSMUST00000187219 192 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm18540-201ENSMUST00000204025 526 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm7380-201ENSMUST00000211599 466 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Mir132-201ENSMUST00000083603 66 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps28Q9D1C8 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm22488-201ENSMUST00000116811 127 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm14007-201ENSMUST00000118288 210 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm2318-201ENSMUST00000119623 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm2768-201ENSMUST00000121062 250 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm15147-201ENSMUST00000122263 483 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm23463-201ENSMUST00000122468 99 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm23591-201ENSMUST00000157663 286 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7438-201ENSMUST00000177664 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7408-201ENSMUST00000178014 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7386-201ENSMUST00000178020 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm3657-201ENSMUST00000178170 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7415-201ENSMUST00000178205 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7398-201ENSMUST00000178589 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Mir713-201ENSMUST00000178651 108 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7391-201ENSMUST00000178680 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm7375-201ENSMUST00000179232 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm3681-201ENSMUST00000179940 639 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm27659-201ENSMUST00000183472 98 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm44720-201ENSMUST00000206076 260 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Gm46136-201ENSMUST00000214730 565 ntBASIC3.93□□□□□ -1.78
Vps28Q9D1C8 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.93□□□□□ -1.78
Vps28Q9D1C8 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms