Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm28437-201ENSMUST00000190277 783 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm29573-201ENSMUST00000190291 919 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm44349-201ENSMUST00000197048 123 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm44449-201ENSMUST00000203610 153 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm44650-201ENSMUST00000206929 194 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm45523-201ENSMUST00000210712 799 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm46136-201ENSMUST00000214730 565 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm23691-201ENSMUST00000101878 107 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm25560-201ENSMUST00000104606 176 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm15108-201ENSMUST00000116160 803 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm15025-201ENSMUST00000118434 418 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm14753-201ENSMUST00000118503 246 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm15312-201ENSMUST00000118827 271 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm12252-201ENSMUST00000119517 219 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm15309-201ENSMUST00000121644 240 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm24517-201ENSMUST00000122560 107 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm26271-201ENSMUST00000158349 104 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm16588-201ENSMUST00000162889 355 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm25874-201ENSMUST00000178030 79 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm18448-201ENSMUST00000186286 599 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm37828-201ENSMUST00000192496 432 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm7182-201ENSMUST00000193351 732 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm43043-201ENSMUST00000196579 412 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm18540-201ENSMUST00000204025 526 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm46998-201ENSMUST00000221444 330 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm24622-201ENSMUST00000082619 162 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm23516-201ENSMUST00000093728 107 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms