Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm9157-201ENSMUST00000117673 225 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm13567-201ENSMUST00000118026 247 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm14877-201ENSMUST00000119803 478 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm25105-201ENSMUST00000122477 130 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Mir6413-201ENSMUST00000184049 108 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm20203-201ENSMUST00000192352 332 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm44348-201ENSMUST00000200165 122 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm21089-201ENSMUST00000215843 325 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC153852.1-201ENSMUST00000217881 567 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm46234-201ENSMUST00000218702 259 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm18557-201ENSMUST00000218710 433 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTRAFQ9CQE8 Gm25799-201ENSMUST00000082643 107 ntBASIC2.55□□□□□ -2
RTRAFQ9CQE8 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm12149-201ENSMUST00000117511 654 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm15282-201ENSMUST00000117707 300 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm14795-201ENSMUST00000118461 471 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm15142-201ENSMUST00000121013 856 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm16458-201ENSMUST00000121428 502 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm14562-201ENSMUST00000129885 543 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm23167-201ENSMUST00000157155 103 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm25883-201ENSMUST00000157781 271 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm23023-201ENSMUST00000158767 109 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm10357-201ENSMUST00000159886 264 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm22120-201ENSMUST00000175590 70 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm7634-201ENSMUST00000185778 553 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm6680-201ENSMUST00000192789 950 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Ighv10-4-201ENSMUST00000193702 299 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm44656-201ENSMUST00000208428 490 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm18645-202ENSMUST00000212222 760 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm19233-201ENSMUST00000219772 936 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 AC158523.2-201ENSMUST00000222708 548 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 AC154305.1-201ENSMUST00000224443 450 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm9765-201ENSMUST00000043170 321 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm25202-201ENSMUST00000082838 191 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.54□□□□□ -2
RTRAFQ9CQE8 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.53□□□□□ -2
RTRAFQ9CQE8 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTRAFQ9CQE8 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms