Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm7909-201ENSMUST00000182688 614 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm29596-201ENSMUST00000185710 385 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm28118-201ENSMUST00000185957 294 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm33626-201ENSMUST00000206790 828 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm18507-201ENSMUST00000218855 525 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm6065-201ENSMUST00000081336 492 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm23626-201ENSMUST00000082458 133 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Snora52-201ENSMUST00000082732 137 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm6043-201ENSMUST00000099961 492 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H1fooQ8VIK3 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm23709-201ENSMUST00000104364 130 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Mir294-201ENSMUST00000104710 84 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm11432-201ENSMUST00000117334 231 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm14868-201ENSMUST00000117840 216 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm5391-201ENSMUST00000121155 613 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm15899-201ENSMUST00000128586 238 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm23171-201ENSMUST00000157159 264 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm24774-201ENSMUST00000157384 134 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm22870-201ENSMUST00000157501 112 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm24507-201ENSMUST00000157683 134 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm25923-201ENSMUST00000158312 138 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm15838-201ENSMUST00000161575 180 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm27588-201ENSMUST00000185096 263 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm18964-201ENSMUST00000193013 563 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm8747-201ENSMUST00000195392 751 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm42924-201ENSMUST00000197261 185 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm8069-201ENSMUST00000197887 154 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm44330-201ENSMUST00000200106 143 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm7039-201ENSMUST00000205138 346 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 AC158803.3-201ENSMUST00000220024 211 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.84□□□□□ -1.79
H1fooQ8VIK3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H1fooQ8VIK3 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
H1fooQ8VIK3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
H1fooQ8VIK3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
H1fooQ8VIK3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
H1fooQ8VIK3 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm22836-201ENSMUST00000158441 61 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm22633-201ENSMUST00000179834 107 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Mir6363-201ENSMUST00000184880 114 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm18291-201ENSMUST00000190791 301 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm38150-201ENSMUST00000192996 452 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm37881-201ENSMUST00000193001 421 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm37636-201ENSMUST00000193583 359 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm18258-201ENSMUST00000210413 542 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Mir30b-201ENSMUST00000083542 96 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H1fooQ8VIK3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.83□□□□□ -1.8
H1fooQ8VIK3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms