Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm45078-201ENSMUST00000205343 546 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm19599-201ENSMUST00000218898 358 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm6562-201ENSMUST00000221903 464 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Mir193b-201ENSMUST00000103784 79 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm12803-201ENSMUST00000118907 821 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm26020-201ENSMUST00000122729 183 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm22380-201ENSMUST00000157479 95 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm24008-201ENSMUST00000157733 138 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm16563-201ENSMUST00000162673 423 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Spin2g-201ENSMUST00000178425 687 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm44208-201ENSMUST00000205199 421 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm7786-201ENSMUST00000210494 436 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm18892-201ENSMUST00000217628 881 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Vmn1r89-206ENSMUST00000227319 985 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Olfr815-201ENSMUST00000071557 951 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Gm23850-201ENSMUST00000083830 169 ntBASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ccdc58Q8R3Q6 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm7123-201ENSMUST00000117647 213 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm13349-201ENSMUST00000118436 411 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm9440-201ENSMUST00000119667 539 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm7363-201ENSMUST00000119883 399 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm20651-201ENSMUST00000177219 329 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Mir6899-201ENSMUST00000184798 64 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Mir6933-201ENSMUST00000184982 81 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm37085-201ENSMUST00000193780 196 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm37007-201ENSMUST00000194234 319 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm44084-201ENSMUST00000203947 409 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm44060-201ENSMUST00000204440 410 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm45048-201ENSMUST00000207058 429 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm9845-201ENSMUST00000056409 598 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm22043-201ENSMUST00000082993 158 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm23096-201ENSMUST00000083447 107 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc58Q8R3Q6 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Ccdc58Q8R3Q6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm12276-201ENSMUST00000121709 301 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm25979-201ENSMUST00000157177 138 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm23325-201ENSMUST00000157422 129 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm22521-201ENSMUST00000158272 134 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Mir5710-201ENSMUST00000176884 69 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm43489-201ENSMUST00000196810 993 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm45690-201ENSMUST00000210775 246 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm45420-201ENSMUST00000211243 425 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm45742-201ENSMUST00000212400 433 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Gm24533-201ENSMUST00000083138 196 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc58Q8R3Q6 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc58Q8R3Q6 Gm25272-201ENSMUST00000104293 128 ntBASIC2.51□□□□□ -2.01
Ccdc58Q8R3Q6 Gm14897-201ENSMUST00000118213 207 ntBASIC2.51□□□□□ -2.01
Ccdc58Q8R3Q6 Gm14656-201ENSMUST00000120342 502 ntBASIC2.51□□□□□ -2.01
Ccdc58Q8R3Q6 Gm15038-201ENSMUST00000122144 296 ntBASIC2.51□□□□□ -2.01
Ccdc58Q8R3Q6 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms