Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.39□□□□□ -1.71
Clrn1Q8K445 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.39□□□□□ -1.71
Clrn1Q8K445 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Clrn1Q8K445 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Clrn1Q8K445 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.39□□□□□ -1.71
Clrn1Q8K445 Gm23848-201ENSMUST00000083826 106 ntBASIC4.39□□□□□ -1.71
Clrn1Q8K445 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Clrn1Q8K445 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Clrn1Q8K445 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.39□□□□□ -1.71
Clrn1Q8K445 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Clrn1Q8K445 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.39□□□□□ -1.71
Clrn1Q8K445 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Mir599-201ENSMUST00000102378 88 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm23879-201ENSMUST00000116874 126 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm14355-201ENSMUST00000117352 264 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm12062-201ENSMUST00000117533 259 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm8129-201ENSMUST00000118230 213 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm13085-201ENSMUST00000118356 171 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm14619-201ENSMUST00000120480 168 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm14926-201ENSMUST00000120650 508 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm16179-201ENSMUST00000120685 373 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm12872-201ENSMUST00000121835 320 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm7840-201ENSMUST00000122086 533 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm22958-201ENSMUST00000122512 184 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm14333-201ENSMUST00000130484 264 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm26310-201ENSMUST00000157766 117 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm21978-201ENSMUST00000179696 377 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm24968-201ENSMUST00000179817 107 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm22633-201ENSMUST00000179834 107 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm26960-201ENSMUST00000182263 412 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm27385-201ENSMUST00000184747 104 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm37961-201ENSMUST00000192729 299 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm46193-201ENSMUST00000219399 364 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm7540-201ENSMUST00000219764 926 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.38□□□□□ -1.71
Clrn1Q8K445 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Clrn1Q8K445 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm23746-201ENSMUST00000104229 125 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm12765-201ENSMUST00000117273 615 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm11971-201ENSMUST00000117715 288 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm14001-201ENSMUST00000118847 247 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm15364-201ENSMUST00000119618 585 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm15905-201ENSMUST00000137042 298 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm22601-201ENSMUST00000157595 250 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm24857-201ENSMUST00000158061 310 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm22383-201ENSMUST00000158188 327 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm26866-201ENSMUST00000180414 802 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm38076-201ENSMUST00000193889 450 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm38008-201ENSMUST00000195333 518 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm43524-201ENSMUST00000197278 298 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm42428-201ENSMUST00000198677 302 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm44041-201ENSMUST00000203678 396 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm8319-201ENSMUST00000205708 641 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm18258-201ENSMUST00000210413 542 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.37□□□□□ -1.71
Clrn1Q8K445 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Clrn1Q8K445 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Clrn1Q8K445 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms