Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14771-201ENSMUST00000118249 203 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm15030-201ENSMUST00000119804 484 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm15452-201ENSMUST00000119877 240 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm11404-201ENSMUST00000120872 494 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm12900-201ENSMUST00000120919 573 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm25438-201ENSMUST00000158281 110 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm23505-201ENSMUST00000158989 130 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm2092-201ENSMUST00000178887 639 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm2759-201ENSMUST00000179938 639 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Mir7056-201ENSMUST00000183776 59 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm28146-201ENSMUST00000185517 701 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm28148-201ENSMUST00000186924 697 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm29263-201ENSMUST00000188718 463 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm44349-201ENSMUST00000197048 123 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm43171-201ENSMUST00000199882 291 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm44016-201ENSMUST00000203463 164 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.55□□□□□ -1.84
Ccdc28bQ8CEG5 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Mir669o-201ENSMUST00000103898 96 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm23431-201ENSMUST00000104006 107 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Mir466n-201ENSMUST00000104798 94 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm12225-201ENSMUST00000117995 298 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm12697-201ENSMUST00000118008 667 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm6664-201ENSMUST00000119138 468 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14282-201ENSMUST00000119484 240 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14695-201ENSMUST00000121721 282 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm7855-201ENSMUST00000137737 687 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm25967-201ENSMUST00000157168 147 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm24190-201ENSMUST00000157976 216 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm24393-201ENSMUST00000158135 97 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm25436-201ENSMUST00000158275 145 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm7346-201ENSMUST00000169661 476 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10067-201ENSMUST00000179462 348 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm27342-201ENSMUST00000183530 109 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm28304-201ENSMUST00000185977 312 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm29259-201ENSMUST00000186396 694 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm29256-201ENSMUST00000189094 312 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm28484-201ENSMUST00000190606 312 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm43198-201ENSMUST00000200927 326 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm44099-201ENSMUST00000203299 112 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm25404-201ENSMUST00000082970 107 ntBASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm24671-201ENSMUST00000104159 158 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14927-201ENSMUST00000120283 454 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm14810-201ENSMUST00000121628 486 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm23234-201ENSMUST00000157304 134 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Gm20689-201ENSMUST00000176033 279 ntBASIC3.53□□□□□ -1.84
Ccdc28bQ8CEG5 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms